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Group: TNT - library [158 articles]

Articles récents ajouter au groupe TNT
  • Structure and evolution of gene regulatory networks in microbial genomes.
    Research in microbiology, Vol. 158, No. 10. (December 2007), pp. 787-794.
    posted to genome network regulation transcription by gcarbajosa to the group TNT on 2008-07-30 15:42:10 as **
  • The individual and common repertoire of DNA-binding transcriptional regulators of Corynebacterium glutamicum, Corynebacterium efficiens, Corynebacterium diphtheriae and Corynebacterium jeikeium deduced from the complete genome sequences.
    BMC genomics, Vol. 6, No. 1. (2005)
    posted to biodegradation corynebacterium for-the-review regulation transcription by gcarbajosa to the group TNT on 2008-07-28 14:03:47 as ***
  • BLASTing small molecules--statistics and extreme statistics of chemical similarity scores
    Bioinformatics, Vol. 24, No. 13. (1 July 2008), pp. i357-365.
    by Pierre Baldi, Ryan W Benz
    posted to chemical-distance score statistics tanimoto by gcarbajosa to the group TNT on 2008-07-28 10:31:42 as *** along with 3 people Yoyek dullhunk girschick
  • TouR-mediated effector-independent growth phase-dependent activation of the sigma54 Ptou promoter of Pseudomonas stutzeri OX1.
    Journal of bacteriology, Vol. 186, No. 21. (November 2004), pp. 7353-7363.
    by D Solera, FL Arenghi, T Woelk, E Galli, P Barbieri
    posted to biodegradation for-the-review ntrc regulation sigma54 tour transcription by gcarbajosa to the group TNT on 2008-07-24 10:47:13 as ***
  • Characterizing the regulation of the Pu promoter in Acinetobacter baylyi ADP1
    Environmental Microbiology, Vol. 10, No. 7. (July 2008), pp. 1668-1680.
    posted to biodegradation for-the-review regulation transcription xylr by gcarbajosa to the group TNT on 2008-07-24 10:27:34 as ***
  • Identification of anthranilate and benzoate metabolic operons of Pseudomonas fluorescens and functional characterization of their promoter regions.
    Microbial cell factories, Vol. 5 (2006)
    by DM Retallack, TC Thomas, Y Shao, KL Haney, SM Resnick, VD Lee, CH Squires
    posted to arac biodegradation for-the-review regulation transcription by gcarbajosa to the group TNT on 2008-07-23 20:43:29 as ***
  • Transcriptional activation of quinoline degradation operons of Pseudomonas putida 86 by the AraC/XylS-type regulator OxoS and cross-regulation of the PqorM promoter by XylS.
    Applied and environmental microbiology, Vol. 71, No. 12. (December 2005), pp. 8618-8626.
    by B Carl, S Fetzner
    posted to biodegradation for-the-review quinoline regulation transcription xyls by gcarbajosa to the group TNT on 2008-07-23 20:13:17 as ***
  • Roles of effectors in XylS-dependent transcription activation: intramolecular domain derepression and DNA binding.
    Journal of bacteriology, Vol. 190, No. 9. (May 2008), pp. 3118-3128.
    posted to biodegradation for-the-review regulation transcription xyls by gcarbajosa to the group TNT on 2008-07-23 19:51:59 as ***
  • Distinct effector-binding sites enable synergistic transcriptional activation by BenM, a LysR-type regulator.
    Journal of molecular biology, Vol. 367, No. 3. (30 March 2007), pp. 616-629.
    by OC Ezezika, S Haddad, TJ Clark, EL Neidle, C Momany
  • The homogentisate pathway: a central catabolic pathway involved in the degradation of L-phenylalanine, L-tyrosine, and 3-hydroxyphenylacetate in Pseudomonas putida.
    Journal of bacteriology, Vol. 186, No. 15. (August 2004), pp. 5062-5077.
  • NahR: effects of replacements at Asn 169 and Arg 248 on promoter binding and inducer recognition
    Archives of Biochemistry and Biophysics, Vol. 434, No. 1. (1 February 2005), pp. 67-74.
    by Hoo H Park, Hae Y Lee, Woon K Lim, Hae J Shin
    posted to binding for-the-review inducer lysr regulation transcription by gcarbajosa to the group TNT on 2008-07-23 16:16:19 as ***
  • Bacterial degradation of xenobiotic compounds: evolution and distribution of novel enzyme activities
    Environmental Microbiology, Vol. 7, No. 12. (December 2005), pp. 1868-1882.
    by Dick B Janssen, Inez J Dinkla, Gerrit J Poelarends, Peter Terpstra
    posted to biodegradation for-the-review metabolism review by gcarbajosa to the group TNT on 2008-07-22 17:41:09 as ** along with 1 person Olaf_Ilzins
  • The organization of the microbial biodegradation network from a systems-biology perspective.
    EMBO Rep, Vol. 4, No. 10. (October 2003), pp. 994-999.
    posted to biodegradation for-the-review network regulation by gcarbajosa to the group TNT on 2008-07-22 16:55:45 as *** along with 1 person icases
  • Biodegradation of dipropyl phthalate and toxicity of its degradation products: a comparison of Fusarium oxysporum f. sp. pisi cutinase and Candida cylindracea esterase.
    Archives of microbiology, Vol. 184, No. 1. (October 2005), pp. 25-31.
    by YH Kim, J Min, KD Bae, MB Gu, J Lee
    posted to biodegradation for-the-review fungi by gcarbajosa to the group TNT on 2008-07-22 16:46:22 as **
  • Biodegradation and detoxification of organophosphate insecticide, malathion by Fusarium oxysporum f. sp. pisi cutinase.
    Chemosphere, Vol. 60, No. 10. (September 2005), pp. 1349-1355.
    by YH Kim, JY Ahn, SH Moon, J Lee
    posted to biodegradation for-the-review fungi by gcarbajosa to the group TNT on 2008-07-22 16:45:55 as ** along with 1 person Doug649
  • Regulation of quinone detoxification by the thiol stress sensing DUF24/MarR-like repressor, YodB in Bacillus subtilis.
    Molecular microbiology, Vol. 67, No. 5. (March 2008), pp. 1108-1124.
    posted to biodegradation for-the-review marr regulation transcription by gcarbajosa to the group TNT on 2008-07-22 16:36:01 as ***
  • Genomics for environmental microbiology
    Current Opinion in Biotechnology, Vol. 17, No. 3. (June 2006), pp. 229-235.
    by Adam M Deutschbauer, Dylan Chivian, Adam P Arkin
    posted to biodegradation for-the-review genomics review by gcarbajosa to the group TNT on 2008-07-22 14:43:42 as ** along with 2 people skato_toyaku icases
  • Growth phase-dependent expression of the Pseudomonas putida KT2440 transcriptional machinery analysed with a genome-wide DNA microarray
    Environmental Microbiology, Vol. 8, No. 1. (January 2006), pp. 165-177.
    by Luis Yuste, Ana B Hervas, Ines Canosa, Raquel Tobes, Jose I Jimenez, Juan Nogales, Manuel M Perez-Perez, Eduardo Santero, Eduardo Diaz, Juan-Luis Ramos, Victor de Lorenzo, Fernando Rojo
    posted to biodegradation cell-cycle for-the-review integration regulation transcription by gcarbajosa to the group TNT on 2008-07-21 18:15:33 as ***
  • Analysis of catRABC operon for catechol degradation from phenol-degrading Rhodococcus erythropolis.
    Applied microbiology and biotechnology, Vol. 76, No. 1. (August 2007), pp. 159-168.
    posted to biodegradation catr for-the-review iclr regulation transcription by gcarbajosa to the group TNT on 2008-07-21 18:13:45 as ****
  • The m-xylene biodegradation capacity of Pseudomonas putida mt-2 is submitted to adaptation to abiotic stresses: evidence from expression profiling of xyl genes
    Environmental Microbiology, Vol. 8, No. 4. (April 2006), pp. 591-602.
    by Francisco Velazquez, Victor de Lorenzo, Marc Valls
    posted to adaptation biodegradation for-the-review in-situ integration regulation transcription by gcarbajosa to the group TNT on 2008-07-21 18:12:10 as ***
  • The coordinate regulation of multiple terminal oxidases by the Pseudomonas putida ANR global regulator
    Environmental Microbiology, Vol. 10, No. 7. (July 2008), pp. 1690-1702.
    posted to anr biodegradation for-the-review integration regulation transcription by gcarbajosa to the group TNT on 2008-07-21 18:09:46 as ***
  • Design of new promoters and of a dual-bioreporter based on cross-activation by the two regulatory proteins XylR and HbpR.
    Environmental microbiology, Vol. 6, No. 11. (November 2004), pp. 1186-1196.
    posted to biodegradation biosensors for-the-review regulation transcription by gcarbajosa to the group TNT on 2008-07-21 18:07:55 as **
  • Illuminating the detection chain of bacterial bioreporters
    Environmental Microbiology, Vol. 6, No. 10. (2004), pp. 1005-1020.
    by Jan R van der Meer, David Tropel, Marco Jaspers
  • The MarR-type repressor MhqR (YkvE) regulates multiple dioxygenases/glyoxalases and an azoreductase which confer resistance to 2-methylhydroquinone and catechol in Bacillus subtilis.
    Molecular microbiology, Vol. 66, No. 1. (October 2007), pp. 40-54.
    posted to biodegradation for-the-review marr regulation transcription by gcarbajosa to the group TNT on 2008-07-21 17:52:33 as ****
  • Transcriptional regulatory networks in bacteria: from input signals to output responses.
    Curr Opin Microbiol, Vol. 9, No. 5. (October 2006), pp. 511-519.
  • Reduction of polynitroaromatic compounds: the bacterial nitroreductases.
    FEMS microbiology reviews, Vol. 32, No. 3. (May 2008), pp. 474-500.
    posted to biodegradation for-the-review marra regulation review soxrs tcst transcription by gcarbajosa to the group TNT on 2008-07-21 17:48:06 as ***
  • Regulation and Characterization of Two Nitroreductase Genes, nprA and nprB, of Rhodobacter capsulatus
    Appl. Environ. Microbiol., Vol. 71, No. 12. (1 December 2005), pp. 7643-7649.
    by Eva Perez-Reinado, Rafael Blasco, Francisco Castillo, Conrado Moreno-Vivian, Dolores M Roldan
    posted to biodegradation for-the-review regulation tcst transcription by gcarbajosa to the group TNT on 2008-07-21 17:45:21 as ***
  • Degradation of o-Xylene by Pseudomonas stutzeri OX1 (Pseudomonas sp. OX1)
    Pseudomonas (2007), pp. 89-105.
    by Paola Barbieri, Dafne Solera, Enrica Galli, Faustino Vidal-Aroca, Giovanni Bertoni
    posted to biodegradation for-the-review regulation tour transcription by gcarbajosa to the group TNT on 2008-07-21 17:42:41 as ***
  • Functional genomics of an anaerobic aromatic-degrading denitrifying bacterium, strain EbN1.
    Applied microbiology and biotechnology, Vol. 68, No. 5. (September 2005), pp. 580-587.
    by R Rabus
    posted to anaerobic biodegradation for-the-review regulation tcst transcription by gcarbajosa to the group TNT on 2008-07-21 17:39:25 as ***
  • Members of the IclR family of bacterial transcriptional regulators function as activators and/or repressors.
    FEMS microbiology reviews, Vol. 30, No. 2. (March 2006), pp. 157-186.
    posted to biodegradation for-the-review iclr regulation transcription by gcarbajosa to the group TNT on 2008-07-21 17:38:12 as ***
  • Anaerobic biodegradation of natural gas condensate can be stimulated by the addition of gasoline
    Biodegradation, Vol. 18, No. 4. (August 2007), pp. 515-523.
    posted to anaerobic biodegradation for-the-review in-situ by gcarbajosa to the group TNT on 2008-07-21 17:33:47 as ***
  • The Pseudomonas putida Crc global regulator is an RNA binding protein that inhibits translation of the AlkS transcriptional regulator
    Molecular Microbiology, Vol. 64, No. 3. (May 2007), pp. 665-675.
    posted to alks biodegradation crc for-the-review integration regulation transcription translation by gcarbajosa to the group TNT on 2008-07-21 17:31:51 as ***
  • Surveying biotransformations with a la carte genetic traps: translating dehydrochlorination of lindane (gamma-hexachlorocyclohexane) into lacZ-based phenotypes
    Environmental Microbiology, Vol. 8, No. 3. (March 2006), pp. 546-555.
    by William W Mohn, Junkal Garmendia, Teca C Galvao, Victor de Lorenzo
    posted to biodegradation for-the-review regulation synthetic-biology transcription by gcarbajosa to the group TNT on 2008-07-21 17:28:42 as ***
  • Mechanism controlling the extended lag period associated with vinyl chloride starvation in Nocardioides sp. strain JS614
    Archives of Microbiology, Vol. 187, No. 3. (March 2007), pp. 217-226.
    posted to biodegradation for-the-review inducers integration regulation transcription by gcarbajosa to the group TNT on 2008-07-21 17:24:47 as ***
  • Styrene, an Unpalatable Substrate with Complex Regulatory Networks
    Pseudomonas (2007), pp. 59-87.
    by Livia Leoni, Giordano Rampioni, Elisabetta Zennaro
    posted to biodegradation for-the-review integration model regulation tcst transcription by gcarbajosa to the group TNT on 2008-07-21 17:21:57 as ***
  • Microbial remediation of nitro-aromatic compounds: an overview.
    Journal of environmental management, Vol. 85, No. 2. (October 2007), pp. 496-512.
    posted to biodegradation for-the-review review by gcarbajosa to the group TNT on 2008-07-21 17:20:40 as ***
  • The IclR family of transcriptional activators and repressors can be defined by a single profile
    Protein Sci, Vol. 15, No. 5. (1 May 2006), pp. 1207-1213.
    by Tino Krell, Antonio J Molina-Henares, Juan L Ramos
    posted to biodegradation family for-the-review iclr profile regulation transcription by gcarbajosa to the group TNT on 2008-07-21 17:05:42 as ***
  • Relevance of nucleotides of the PcaU binding site from Acinetobacter baylyi
    Microbiology, Vol. 154, No. 3. (1 March 2008), pp. 756-766.
    by Bettina Jerg, Ulrike Gerischer
    posted to binding biodegradation for-the-review regulation transcription by gcarbajosa to the group TNT on 2008-07-21 17:03:44 as ***
  • Emergence of novel functions in transcriptional regulators by regression to <i>stem</i> protein types
    Molecular Microbiology, Vol. 65, No. 4. (2007), pp. 907-919.
    by Teca C Galvão, Mario Mencía, Víctor de Lorenzo
    posted to biodegradation evolution for-the-review regulation transcription xylr by gcarbajosa to the group TNT on 2008-07-21 16:59:04 as ***
  • Emergence of two types of nondechlorinating variants in the tetrachloroethene-halorespiring Desulfitobacterium sp. strain Y51.
    Applied microbiology and biotechnology, Vol. 70, No. 6. (May 2006), pp. 720-728.
    posted to biodegradation for-the-review new-enzyme by gcarbajosa to the group TNT on 2008-07-21 16:58:05 as **
  • Selection of biocatalysts for chemical synthesis.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 103, No. 6. (7 February 2006), pp. 1693-1698.
    posted to biodegradation biosensors for-the-review regulation transcription by gcarbajosa to the group TNT on 2008-07-21 16:56:36 as ***
  • New insights into the BzdR-mediated transcriptional regulation of the anaerobic catabolism of benzoate in Azoarcus sp. CIB
    Microbiology, Vol. 154, No. 1. (1 January 2008), pp. 306-316.
    by Gonzalo Durante-Rodriguez, Teresa M Zamarro, Jose L Garcia, Eduardo Diaz, Manuel Carmona
    posted to benzoate biodegradation bzdr for-the-review new-family regulation transcription by gcarbajosa to the group TNT on 2008-07-21 16:54:49 as ***
  • Differential regulation and xenobiotic induction of tandem P450 monooxygenase genes pc-1 (CYP63A1) and pc-2 (CYP63A2) in the white-rot fungus Phanerochaete chrysosporium
    Applied Microbiology and Biotechnology, Vol. 65, No. 5. (1 October 2004), pp. 559-565.
    by Harshavardhan Doddapaneni, Jagjit S Yadav
    posted to biodegradation for-the-review fungi regulation transcription by gcarbajosa to the group TNT on 2008-07-21 16:53:40 as ***
  • Identification and analysis of a glutaryl-CoA dehydrogenase-encoding gene and its cognate transcriptional regulator from Azoarcus sp. CIB
    Environmental Microbiology, Vol. 10, No. 2. (February 2008), pp. 474-482.
    posted to biodegradation for-the-review lysr regulation transcription by gcarbajosa to the group TNT on 2008-07-21 16:52:28 as ***
  • Characterization of two alkane hydroxylase genes from the marine hydrocarbonoclastic bacterium Alcanivorax borkumensis.
    Environmental microbiology, Vol. 6, No. 3. (March 2004), pp. 264-273.
    posted to alkane alks biodegradation for-the-review regulation transcription by gcarbajosa to the group TNT on 2008-07-21 16:51:11 as ***
  • Dual Role of Response Regulator StyR in Styrene Catabolism Regulation
    Appl. Environ. Microbiol., Vol. 71, No. 9. (1 September 2005), pp. 5411-5419.
    by Livia Leoni, Giordano Rampioni, Valeria Di Stefano, Elisabetta Zennaro
    posted to binding biodegradation for-the-review regulation styrene transcription by gcarbajosa to the group TNT on 2008-07-17 05:47:41 as ***
  • Hierarchical binding of the TodT response regulator to its multiple recognition sites at the tod pathway operon promoter.
    Journal of molecular biology, Vol. 376, No. 2. (15 February 2008), pp. 325-337.
    by J Lacal, ME Guazzaroni, A Busch, T Krell, JL Ramos
    posted to biodegradation for-the-review regulation tcrst transcription by gcarbajosa to the group TNT on 2008-07-16 21:44:49 as ***
  • The TodS-TodT two-component regulatory system recognizes a wide range of effectors and works with DNA-bending proteins.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 103, No. 21. (23 May 2006), pp. 8191-8196.
    by J Lacal, A Busch, ME Guazzaroni, T Krell, JL Ramos
    posted to biodegradation dna-bending for-the-review regulation tcst transcription by gcarbajosa to the group TNT on 2008-07-16 21:42:43 as ***
  • CatM Regulation of the benABCDE Operon: Functional Divergence of Two LysR-Type Paralogs in Acinetobacter baylyi ADP1
    Appl. Environ. Microbiol., Vol. 72, No. 3. (1 March 2006), pp. 1749-1758.
    by Obidimma C Ezezika, Lauren S Collier-Hyams, Haley A Dale, Andrew C Burk, Ellen L Neidle
    posted to benm biodegradation catm evolution for-the-review lysr regulation transcription by gcarbajosa to the group TNT on 2008-07-16 21:40:17 as ***
  • Functional identification of novel genes involved in the glutathione-independent gentisate pathway in Corynebacterium glutamicum.
    Appl Environ Microbiol, Vol. 71, No. 7. (July 2005), pp. 3442-3452.
    by XH Shen, CY Jiang, Y Huang, ZP Liu, SJ Liu
    posted to biodegradation for-the-review gentisate regulation transcription by gcarbajosa to the group TNT on 2008-07-16 21:37:58 as ***
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