S'inscrire | Se connecter | FAQ      [?] 

Mot-clé sequencing [237 articles]

Recent papers classified by the tag sequencing.
  • The impact of next-generation sequencing technology on genetics
    Trends in Genetics, Vol. In Press, Corrected Proof
    by Elaine R Mardis
    posted to bioinformatics comparison genetics impact review sequencing by zerojinx on 2008-02-25 11:51:12 as ** along with 7 people hpaces giovenko jyuh dchughes djkt niallhaslam urgi
  • Generation and Characterization of SCARs by Cloning and Sequencing of RAPD Products: A Strategy for Species-specific Marker Development in Bamboo
    Annals of Botany, Vol. 95, No. 5. (16 April 2005), pp. 835-841.
    by MALAY Malay, Bhattacharya AMIK Samik, AMITA Amita
    posted to a and bamboo by characterization cloning development for generation in marker of products rapd scars sequencing species-specific strategy by xixibio on 2006-04-19 13:55:41 as **
  • High-throughput oncogene mutation profiling in human cancer
    Nature Genetics, Vol. 39, No. 3. (11 February 2007), pp. 347-351.
    by Roman K Thomas, Alissa C Baker, Ralph M Debiasi, Wendy Winckler, Thomas Laframboise, William M Lin, Meng Wang, Whei Feng, Thomas Zander, Laura E Macconnaill, Jeffrey C Lee, Rick Nicoletti, Charlie Hatton, Mary Goyette, Luc Girard, Kuntal Majmudar, Liuda Ziaugra, Kwok-Kin Wong, Stacey Gabriel, Rameen Beroukhim, Michael Peyton, Jordi Barretina, Amit Dutt, Caroline Emery, Heidi Greulich, Kinjal Shah, Hidefumi Sasaki, Adi Gazdar, John Minna, Scott A Armstrong, Ingo K Mellinghoff, Stephen F Hodi, Glenn Dranoff, Paul S Mischel, Tim F Cloughesy, Stan F Nelson, Linda M Liau, Kirsten Mertz, Mark A Rubin, Holger Moch, Massimo Loda, William Catalona, Jonathan Fletcher, Sabina Signoretti, Frederic Kaye, Kenneth C Anderson, George D Demetri, Reinhard Dummer, Stephan Wagner, Meenhard Herlyn, William R Sellers, Matthew Meyerson, Levi A Garraway
    posted to genomics mutation sequencing by xingxu on 2007-08-17 16:51:32 as ** along with 4 people and 1 group cerami jfr aviad_work ealloza BioinfoCIPF
  • Next generation sequencing technologies
    Drug Discovery Today: Technologies, Vol. 2, No. 3. ( 2005), pp. 255-260.
    by Thomas Jarvie
    posted to prospective review sequencing by xingxu on 2008-01-11 19:22:47 as **
  • The Diploid Genome Sequence of an Individual Human
    PLoS Biology, Vol. 5, No. 10. (1 October 2007), e254.
    by Samuel Levy, Granger Sutton, Pauline C Ng, Lars Feuk, Aaron L Halpern, Brian P Walenz, Nelson Axelrod, Jiaqi Huang, Ewen F Kirkness, Gennady Denisov, Yuan Lin, Jeffrey R Macdonald, Andy W Pang, Mary Shago, Timothy B Stockwell, Alexia Tsiamouri, Vineet Bafna, Vikas Bansal, Saul A Kravitz, Dana A Busam, Karen Y Beeson, Tina C Mcintosh, Karin A Remington, Josep F Abril, John Gill, Jon Borman, Yu-Hui Rogers, Marvin E Frazier, Stephen W Scherer, Robert L Strausberg, Craig J Venter
    posted to genomics individual sequencing by xingxu on 2007-12-27 01:48:09 as ** along with 17 people and 1 group operon carlblesius bpb balicea skhadar dullhunk djkt jackjackjjj ramensky massivemayhem jasonbobe PredictER lp2 cabbagezs hpaces maburkitt nhp Bioinformatics
  • A Sanger/pyrosequencing hybrid approach for the generation of high-quality draft assemblies of marine microbial genomes.
    Proc Natl Acad Sci U S A (13 July 2006)
    by Susanne M D M Goldberg, Justin Johnson, Dana Busam, Tamara Feldblyum, Steve Ferriera, Robert Friedman, Aaron Halpern, Hoda Khouri, Saul A A Kravitz, Federico M M Lauro, Kelvin Li, Yu-Hui H Rogers, Robert Strausberg, Granger Sutton, Luke Tallon, Torsten Thomas, Eli Venter, Marvin Frazier, J Craig C Venter
    posted to marine metagenomics methods microbiology sequencing by xingxu on 2008-01-11 19:17:25 as ** along with 6 people and 4 groups bjorns balicea dchughes azazello beatrizfernandez GustavoLacerda G4ID Microbial-Ecology Genetics-of-Gambling MBLAB
  • The marine viromes of four oceanic regions.
    PLoS Biol, Vol. 4, No. 11. (November 2006)
    by FE Angly, B Felts, M Breitbart, P Salamon, RA Edwards, C Carlson, AM Chan, M Haynes, S Kelley, H Liu, JM Mahaffy, JE Mueller, J Nulton, R Olson, R Parsons, S Rayhawk, CA Suttle, F Rohwer
    posted to marine metagenomics sequencing virology by xingxu on 2008-01-11 19:16:12 as ** along with 2 people balicea bluto
  • Microbial diversity in the deep sea and the underexplored "rare biosphere"
    Proc Natl Acad Sci U S A (31 July 2006)
    by Mitchell L L Sogin, Hilary G G Morrison, Julie A A Huber, David Mark M Welch, Susan M M Huse, Phillip R R Neal, Jesus M M Arrieta, Gerhard J J Herndl
    posted to marine metagenomics sequencing by xingxu on 2008-01-11 19:15:25 as ** along with 8 people and 1 group mcox Olaf_Ilzins jmeppley balicea madhadron rabu bluto kinestetika microbiology_nijmegen
  • Using pyrosequencing to shed light on deep mine microbial ecology.
    BMC Genomics, Vol. 7 (2006)
    by RA Edwards, B Rodriguez-Brito, L Wegley, M Haynes, M Breitbart, DM Peterson, MO Saar, S Alexander, EC Alexander, F Rohwer
    posted to ecology metagenomics sequencing by xingxu on 2008-01-11 19:14:09 as ** along with 5 people darioacha mcox jmeppley balicea rabu
  • Accurate Multiplex Polony Sequencing of an Evolved Bacterial Genome
    Science, Vol. 309, No. 5741. (09 September 2005), pp. 1728-1732.
    by Jay Shendure, Gregory J Porreca, Nikos B Reppas, Xiaoxia Lin, John P Mccutcheon, Abraham M Rosenbaum, Michael D Wang, Kun Zhang, Robi D Mitra, George M Church
    posted to genomics sequencing by xingxu on 2008-01-11 19:08:07 as ** along with 5 people and 2 groups arve balajis dchughes AaronDarling nhp G4ID Genetics-of-Gambling
  • Genome sequencing in microfabricated high-density picolitre reactors
    Nature (31 July 2005)
    by Marcel Margulies, Michael Egholm, William E Altman, Said Attiya, Joel S Bader, Lisa A Bemben, Jan Berka, Michael S Braverman, Yi-Ju Chen, Zhoutao Chen, Scott B Dewell, Lei Du, Joseph M Fierro, Xavier V Gomes, Brian C Godwin, Wen He, Scott Helgesen, Chun H Ho, Gerard P Irzyk, Szilveszter C Jando, Maria LI Alenquer, Thomas P Jarvie, Kshama B Jirage, Jong-Bum Kim, James R Knight, Janna R Lanza, John H Leamon, Steven M Lefkowitz, Ming Lei, Jing Li, Kenton L Lohman, Hong Lu, Vinod B Makhijani, Keith E Mcdade, Michael P Mckenna, Eugene W Myers, Elizabeth Nickerson, John R Nobile, Ramona Plant, Bernard P Puc, Michael T Ronan, George T Roth, Gary J Sarkis, Jan F Simons, John W Simpson, Maithreyan Srinivasan, Karrie R Tartaro, Alexander Tomasz, Kari A Vogt, Greg A Volkmer, Shally H Wang, Yong Wang, Michael P Weiner, Pengguang Yu, Richard F Begley, Jonathan M Rothberg
    posted to sequencing by xingxu on 2008-01-11 19:07:07 as ** along with 22 people and 3 groups kieran101 GustavoLacerda farhat mcox bpb carpi bjorns dayjm jmeppley arve RMGraze JAShapiro balajis cdawson AaronDarling treangen usagi-kirin azazello beatrizfernandez wenhan erbon tpreeprem Microbial-Ecology GIG gatech-compgenomics
  • The complete genome sequence of the gastric pathogen Helicobacter pylori.
    Nature, Vol. 388, No. 6642. (7 August 1997), pp. 539-547.
    by JF Tomb, O White, AR Kerlavage, RA Clayton, GG Sutton, RD Fleischmann, KA Ketchum, HP Klenk, S Gill, BA Dougherty, K Nelson, J Quackenbush, L Zhou, EF Kirkness, S Peterson, B Loftus, D Richardson, R Dodson, HG Khalak, A Glodek, K McKenney, LM Fitzegerald, N Lee, MD Adams, JC Venter
    posted to genomics pylori sequencing by xingxu on 2008-03-19 23:53:19 as ** along with 2 people evaf bjorns
  • Advanced sequencing technologies and their wider impact in microbiology
    J Exp Biol, Vol. 210, No. 9. (1 May 2007), pp. 1518-1525.
    by Neil Hall
    posted to microbiology review sequencing by xingxu on 2008-01-10 21:05:47 as ** along with 2 people kmdaily rschulz
  • Next-generation sequencing transforms today's biology
    Nature Methods, Vol. 5, No. 1. (19 December 2007), pp. 16-18.
    by Stephan C Schuster
    posted to news opinion review sequencing by xingxu on 2008-01-10 21:04:24 as ** along with 4 people kmdaily jyuh yas balicea
  • Primer: Sequencing—the next generation
    Nature Methods, Vol. 5, No. 1. (19 December 2007), pp. 15-15.
    by Nicole Rusk, Veronique Kiermer
    posted to review sequencing by xingxu on 2008-01-10 21:03:46 as **
  • Celebrity genomes alarm researchers
    Nature, Vol. 447, No. 7143. (23 May 2007), pp. 358-359.
    by Erika Check
    posted to alarm celebrity danger dna genome genomics sequencing watson by xico on 2007-06-01 17:52:20 as **** along with 1 person and 1 group dullhunk WetBiology
  • notes Sequencing by hybridization (SBH): advantages, achievements, and opportunities.
    Adv Biochem Eng Biotechnol, Vol. 77 (2002), pp. 75-101.
    by R Drmanac, S Drmanac, G Chui, R Diaz, A Hou, H Jin, P Jin, S Kwon, S Lacy, B Moeur, J Shafto, D Swanson, T Ukrainczyk, C Xu, D Little
    posted to dna hybridization methods microarray review sanger sequencing techniques by xico on 2007-02-13 00:36:40 as read along with 1 person and 3 groups dchughes WetBiology G4ID Genetics-of-Gambling
  • RNA-seq: An assessment of technical reproducibility and comparison with gene expression arrays
    Genome Res. (11 June 2008), gr.079558.108.
    by John Marioni, Cristopher Mason, Shrikant Mane, Matthew Stephens, Yoav Gilad
    posted to transcriptome sequencing rna next gen by vmarshal on 2008-07-01 14:01:46 as ***** along with 11 people and 1 group Ema jyuh caseybrown lusk fpattyn ela503 semrich balicea vega giovanni stajich Berkeley Mycology
  • Evaluation of paired-end sequencing strategies for detection of genome rearrangements in cancer.
    PLoS computational biology, Vol. 4, No. 4. (April 2008)
    by A Bashir, S Volik, C Collins, V Bafna, BJ Raphael
    posted to sequencing paired-end bioinformatics by vega on 2008-06-19 08:27:17 as **
  • Dynamic Regulation of Nucleosome Positioning in the Human Genome
    Cell, Vol. 132, No. 5. (7 March 2008), pp. 887-898.
    by Dustin E Schones, Kairong Cui, Suresh Cuddapah, Tae-Young Roh, Artem Barski, Zhibin Wang, Gang Wei, Keji Zhao
    posted to sonication sequencing nucleosome epigenetic chromatin bioinformatics by vega on 2008-06-30 15:16:33 as ** along with 7 people mikaelhuss sameetmehta aalibes dchughes sleepingcell idonaldson oelemento
  • Molecular Epidemiology of Recent North American H5 and H7 Avian Influenza Viruses
    Avian Diseases, Vol. 47 (2003), pp. 95-104.
    by M García, JW Latimer, DL Suarez, RD Slemons, DE Swayne, ML Perdue
    posted to wild waterfowl sequencing migratory genetic ai by ucdmary on 2008-07-09 22:50:35 as **
  • Sequencing Medicago truncatula expressed sequenced tags using 454 Life Sciences technology
    BMC Genomics, Vol. 7 (24 October 2006), 272.
    by Foo Cheung, Brian J Haas, Susanne MD Goldberg, Gregory D May, Yongli Xiao, Christopher D Town
    posted to 454 sequencing by tpreeprem on 2008-01-16 02:43:48 as ** along with 2 people and 1 group tonia_schwartz usagi-kirin gatech-compgenomics
  • High-throughput sequence alignment using Graphics Processing Units
    BMC Bioinformatics, Vol. 8, No. 1. (2007)
    by Michael Schatz, Cole Trapnell, Arthur Delcher, Amitabh Varshney
    posted to gpu sequencing software by tpreeprem on 2008-01-16 01:59:46 as ** along with 10 people and 1 group Yanno jyuh sephy lusk laughcry nedwards mdimon cndewey heliopais urgi gatech-compgenomics
  • Long PCR amplification of the entire mitochondrial genome from individual helminths for direct sequencing.
    Nat Protoc, Vol. 2, No. 10. (2007), pp. 2339-2344.
    by M Hu, AR Jex, BE Campbell, RB Gasser
    posted to singleworm sequencing pcr parasitichelminths parasitic helminths by tharris on 2008-06-08 19:22:55 as ** along with 1 person dchughes
  • Genomic sequencing of single microbial cells from environmental samples.
    Current opinion in microbiology (10 June 2008)
    by Thomas Ishoey, Tanja Woyke, Ramunas Stepanauskas, Mark Novotny, Roger S S Lasken
    posted to sequencing microbiology methods mda genomesequencing genome by tharris on 2008-06-18 23:47:34 as **
  • Genome sequence of Haloarcula marismortui: A halophilic archaeon from the Dead Sea
    Genome Res., Vol. 14, No. 11. (1 November 2004), pp. 2221-2234.
    by Nitin S Baliga, Richard Bonneau, Marc T Facciotti, Min Pan, Gustavo Glusman, Eric W Deutsch, Paul Shannon, Yulun Chiu, Rueyhung S Weng, Rueichi R Gan, Pingliang Hung, Shailesh V Date, Edward Marcotte, Leroy Hood, Wailap V Ng
    posted to archaea bioinformatics genomics haloarcula interactome networks sequencing by svdate on 2007-12-04 15:44:07 as ***** along with 1 person wxg119
  • Gene expression profiling by massively parallel sequencing
    Genome Res. (21 November 2007), gr.6984908.
    by Tatiana T Torres, Muralidhar Metta, Birgit Ottenwalder, Christian Schlotterer
    posted to 454 expression gene microarray profiling sequencing by stsaft on 2008-04-04 18:29:10 as ** along with 10 people caseybrown gracio jyuh jfr dchughes echinotrix giovanni ghattem idonaldson ohara
  • Next-Generation Sequencing: The Race Is On
    Cell, Vol. 132, No. 5. (7 March 2008), pp. 721-723.
    by Andreas von Bubnoff
    posted to dna review sequencing by stsaft on 2008-04-04 18:08:41 as ** along with 2 people jyuh dchughes
  • Motion-corrected free-breathing delayed enhancement imaging of myocardial infarction
    Magnetic Resonance in Medicine, Vol. 53, No. 1. (2005), pp. 194-200.
    by Peter Kellman, Andrew C Larson, Li-Yueh Hsu, Yiu-Cho Chung, Orlando P Simonetti, Elliot R Mcveigh, Andrew E Arai
    posted to mri sequencing technology by stsaft on 2008-01-16 00:22:20 as **
  • The genome sequence of the rice blast fungus Magnaporthe grisea
    Nature, Vol. 434, No. 7036., pp. 980-986.
    by Ralph A Dean, Nicholas J Talbot, Daniel J Ebbole, Mark L Farman, Thomas K Mitchell, Marc J Orbach, Michael Thon, Resham Kulkarni, Jin-Rong Xu, Huaqin Pan, Nick D Read, Yong-Hwan Lee, Ignazio Carbone, Doug Brown, Yeon Y Oh, Nicole Donofrio, Jun S Jeong, Darren M Soanes, Slavica Djonovic, Elena Kolomiets, Cathryn Rehmeyer, Weixi Li, Michael Harding, Soonok Kim, Marc-Henri Lebrun, Heidi Bohnert, Sean Coughlan, Jonathan Butler, Sarah Calvo, Li-Jun Ma, Robert Nicol, Seth Purcell, Chad Nusbaum, James E Galagan, Bruce W Birren
    posted to fungi genome genome_paper magnaporthe sequencing by stajich on 2007-12-12 19:24:27 as ** along with 2 people and 1 group jwortman alexl Berkeley Mycology
  • Systematic evaluation of variability in ChIP-chip experiments using predefined DNA targets
    Genome Res. (7 February 2008), gr.7080508.
    by David S Johnson, Wei Li, Benjamin D Gordon, Arindam Bhattacharjee, Bo Curry, Jayati Ghosh, Leonardo Brizuela, Jason S Carroll, Myles Brown, Paul Flicek, Christopher M Koch, Ian Dunham, Mark Bieda, Xiaoqin Xu, Peggy J Farnham, Philipp Kapranov, David A Nix, Thomas R Gingeras, Xinmin Zhang, Heather Holster, Nan Jiang, Roland Green, Jun S Song, Scott A Mccuine, Elizabeth Anton, Loan Nguyen, Nathan D Trinklein, Zhen Ye, Keith Ching, David Hawkins, Bing Ren, Peter C Scacheri, Joel Rozowsky, Alexander Karpikov, Ghia Euskirchen, Sherman Weissman, Mark Gerstein, Michael Snyder, Annie Yang, Zarmik Moqtaderi, Heather Hirsch, Hennady P Shulha, Yutao Fu, Zhiping Weng, Kevin Struhl, Richard M Myers, Jason D Lieb, Shirley X Liu
    posted to solexa sequencing chipseq by stajich on 2008-05-02 02:05:43 as ** along with 10 people and 2 groups gracio lp2 magusina jfr kengg djkt xiaobeizhao cabbagezs idonaldson caseybrown Berkeley Mycology BergmanLab
  • Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells
    Genome Res. (19 February 2008), gr.7179508.
    by Ryan D Morin, Michael D O'Connor, Malachi Griffith, Florian Kuchenbauer, Allen Delaney, Anna-Liisa Prabhu, Yongjun Zhao, Helen Mcdonald, Thomas Zeng, Martin Hirst, Connie J Eaves, Marco A Marra
    posted to bioinformatics human mirna sequencing solexa by stajich on 2008-02-19 22:01:54 as ** along with 3 people and 1 group caseybrown jfr maralena Berkeley Mycology
  • The new paradigm of flow cell sequencing
    Genome Res., Vol. 18, No. 6. (1 June 2008), pp. 839-846.
    by Robert A Holt, Steven J Jones
    posted to solexa sequencing nextgensequencing illumina genome 454 by stajich on 2008-06-02 20:17:41 as ** along with 11 people and 1 group dchughes serdarbozdag hpaces balicea tharris reyez caseybrown GustavoLacerda kintoki lp2 tmmurali Berkeley Mycology
  • Whole-Genome Shotgun Sequencing of Mitochondria from Ancient Hair Shafts
    Science, Vol. 317, No. 5846. (28 September 2007), pp. 1927-1930.
    by Gilbert, Lynn P Tomsho, Snjezana Rendulic, Michael Packard, Daniela I Drautz, Andrei Sher, Alexei Tikhonov, Love Dalen, Tatyana Kuznetsova, Pavel Kosintsev, Paula F Campos, Thomas Higham, Matthew J Collins, Andrew S Wilson, Fyodor Shidlovskiy, Bernard Buigues, Per G Ericson, Mietje Germonpre, Anders Gotherstrom, Paola Iacumin, Vladimir Nikolaev, Malgosia Nowak-Kemp, Eske Willerslev, James R Knight, Gerard P Irzyk, Clotilde S Perbost, Karin M Fredrikson, Timothy T Harkins, Sharon Sheridan, Webb Miller, Stephan C Schuster
    posted to ancient_dna genome mammoth sequencing by stajich on 2007-09-28 17:47:05 as ** along with 2 people dchughes EsepBib
  • Endogenous siRNA and miRNA targets identified by sequencing of the Arabidopsis degradome.
    Current biology : CB, Vol. 18, No. 10. (20 May 2008), pp. 758-762.
    by C Addo-Quaye, TW Eshoo, DP Bartel, MJ Axtell
    posted to solexa smallrna sirna sequencing mirna methods illumina bioinformatics by stajich on 2008-06-13 01:19:25 as ** along with 1 group Berkeley Mycology
  • Global identification of microRNA-target RNA pairs by parallel analysis of RNA ends.
    Nature biotechnology (9 June 2008)
    by Marcelo A A German, Manoj Pillay, Dong-Hoon H Jeong, Amit Hetawal, Shujun Luo, Prakash Janardhanan, Vimal Kannan, Linda A A Rymarquis, Kan Nobuta, Rana German, Emanuele De Paoli, Cheng Lu, Gary Schroth, Blake C C Meyers, Pamela J J Green
    posted to solexa smallrna sequencing mirna methods htg bioinformatics by stajich on 2008-06-13 01:11:30 as ** along with 1 group Berkeley Mycology
  • Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs
    Genome Res. (7 November 2007), gr.6597907.
    by Graham J Ruby, Alexander Stark, Wendy K Johnston, Manolis Kellis, David P Bartel, Eric C Lai
    posted to drosophila mirna noncoding_rna sequencing by stajich on 2008-04-05 19:57:14 as ** along with 5 people and 2 groups lp2 cabbagezs heliopais urgi Alexander_Kanitz microRNA Berkeley Mycology
  • Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures
    Nature, Vol. 450, No. 7167., pp. 219-232.
    by Alexander Stark, Michael F Lin, Pouya Kheradpour, Jakob S Pedersen, Leopold Parts, Joseph W Carlson, Madeline A Crosby, Matthew D Rasmussen, Sushmita Roy, Ameya N Deoras, Graham J Ruby, Julius Brennecke, Harvard F Curators, Berkeley, Emily Hodges, Angie S Hinrichs, Anat Caspi, Benedict Paten, Seung-Won Park, Mira V Han, Morgan L Maeder, Benjamin J Polansky, Bryanne E Robson, Stein Aerts, Jacques van Helden, Bassem Hassan, Donald G Gilbert, Deborah A Eastman, Michael Rice, Michael Weir, Matthew W Hahn, Yongkyu Park, Colin N Dewey, Lior Pachter, James W Kent, David Haussler, Eric C Lai, David P Bartel, Gregory J Hannon, Thomas C Kaufman, Michael B Eisen, Andrew G Clark, Douglas Smith, Susan E Celniker, William M Gelbart, Manolis Kellis
    posted to comparative_genomics drosophila genome genome_paper sequencing by stajich on 2008-04-05 19:56:58 as ** along with 13 people and 2 groups shuzhens PetrovLab operon tmmurali djkt timflutre lp2 cabbagezs nklee hpaces roys caseybrown gjuggler csb_journal_club_public Berkeley Mycology
  • The Sorcerer II Global Ocean Sampling Expedition: Northwest Atlantic through Eastern Tropical Pacific
    PLoS Biology, Vol. 5, No. 3. (1 March 2007), e77.
    by Douglas B Rusch, Aaron L Halpern, Granger Sutton, Karla B Heidelberg, Shannon Williamson, Shibu Yooseph, Dongying Wu, Jonathan A Eisen, Jeff M Hoffman, Karin Remington, Karen Beeson, Bao Tran, Hamilton Smith, Holly Baden-Tillson, Clare Stewart, Joyce Thorpe, Jason Freeman, Cynthia Andrews-Pfannkoch, Joseph E Venter, Kelvin Li, Saul Kravitz, John F Heidelberg, Terry Utterback, Yu-Hui Rogers, Luisa I Falcón, Valeria Souza, Germán Bonilla-Rosso, Luis E Eguiarte, David M Karl, Shubha Sathyendranath, Trevor Platt, Eldredge Bermingham, Victor Gallardo, Giselle Tamayo-Castillo, Michael R Ferrari, Robert L Strausberg, Kenneth Nealson, Robert Friedman, Marvin Frazier, Craig J Venter
    posted to marine metagenomics sequencing by stajich on 2007-03-13 17:06:52 as ** along with 8 people and 4 groups jmeppley kaspermunch michC jdelcampo skoch3 beatrizfernandez kinestetika Thaverkamp Bioinformatics Microbial-Ecology Koch_Lab microbiology_nijmegen
  • Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning
    Nature (17 February 2008)
    by Shawn J Cokus, Suhua Feng, Xiaoyu Zhang, Zugen Chen, Barry Merriman, Christian D Haudenschild, Sriharsa Pradhan, Stanley F Nelson, Matteo Pellegrini, Steven E Jacobsen
    posted to arabidopsis bisulphite methylation pattern sequencing by slonik on 2008-04-06 23:38:31 as **** along with 4 people djkt ghattem epigenetics mdimon
  • TileQC: a system for tile-based quality control of Solexa data
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Peter Dolan, Dee Denver
    posted to sequencing by slevy03 on 2008-06-06 00:48:23 as ** along with 3 people mdimon reyez neils
  • Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex
    Nature Methods, Vol. 5, No. 3. (10 February 2008), pp. 235-237.
    by Micah Hamady, Jeffrey J Walker, Kirk J Harris, Nicholas J Gold, Rob Knight
    posted to sequencing pooling by slevy03 on 2008-07-18 21:49:09 as ** along with 2 people sconlan jyuh
  • A pyrosequencing-tailored nucleotide barcode design unveils opportunities for large-scale sample multiplexing.
    Nucleic acids research, Vol. 35, No. 19. (2007)
    by P Parameswaran, R Jalili, L Tao, S Shokralla, B Gharizadeh, M Ronaghi, AZ Fire
    posted to sequencing pooling by slevy03 on 2008-07-18 21:46:20 as ** along with 1 person alexisfjdufresne
  • Parallel tagged sequencing on the 454 platform.
    Nature protocols, Vol. 3, No. 2. (2008), pp. 267-278.
    by M Meyer, U Stenzel, M Hofreiter
    posted to sequencing pooling by slevy03 on 2008-07-18 21:37:59 as **
  • Optimal pooling for genome re-sequencing with ultra-high-throughput short-read technologies.
    Bioinformatics (Oxford, England), Vol. 24, No. 13. (1 July 2008)
    by I Hajirasouliha, F Hormozdiari, SC Sahinalp, I Birol
    posted to sequencing pooling by slevy03 on 2008-07-18 21:20:02 as **
  • Validation of microarray-based resequencing of 93 worldwide mitochondrial genomes.
    Human mutation (11 July 2008)
    by Anne Hartmann, Marian Thieme, Lahiri K K Nanduri, Thomas Stempfl, Christoph Moehle, Toomas Kivisild, Peter J J Oefner
    posted to sequencing mitochondria by slevy03 on 2008-07-18 21:06:44 as **
  • ChIP-seq: welcome to the new frontier
    Nature Methods, Vol. 4, No. 8., pp. 613-614.
    by Elaine R Mardis
    posted to chip-seq sequencing by slevy03 on 2008-03-07 18:55:07 as *** along with 1 person sleepingcell
  • Genome-wide maps of chromatin state in pluripotent and lineage-committed cells
    Nature (01 July 2007)
    by Tarjei S Mikkelsen, Manching Ku, David B Jaffe, Biju Issac, Erez Lieberman, Georgia Giannoukos, Pablo Alvarez, William Brockman, Tae-Kyung Kim, Richard P Koche, William Lee, Eric Mendenhall, Aisling O’donovan, Aviva Presser, Carsten Russ, Xiaohui Xie, Alexander Meissner, Marius Wernig, Rudolf Jaenisch, Chad Nusbaum, Eric S Lander, Bradley E Bernstein
    posted to chip-seq sequencing by slevy03 on 2008-03-24 17:24:01 as ** along with 13 people and 1 group jasonflannick jyuh brant dchughes vega kengg vplagnol olympos epigenetics bioyang cabbagezs rschulz inesdesantiago EisenLab
  • From micrograms to picograms: quantitative PCR reduces the material demands of high-throughput sequencing
    Nucl. Acids Res. (15 December 2007), gkm1095.
    by Matthias Meyer, Adrian W Briggs, Tomislav Maricic, Barbara