S'inscrire | Se connecter | FAQ      [?] 
Recent | Unread | Search | Authors | Tags | Export

de cisevol cis-regulatory [197 articles]

Recent papers added to de cisevol library classified by the tag cis-regulatory. You can also see everyone's cis-regulatory.
  • Selective Constraints in Experimentally Defined Primate Regulatory Regions
    PLoS Genet, Vol. 4, No. 8. (2008), e1000157.
    by Daniel J Gaffney, Ran Blekhman, Jacek Majewski
    posted to cis-regulatory mammals by cisevol on 2008-08-19 12:05:55 as ** along with 7 people and 2 groups alhufton djkt bpcusack aprasad pradiptaray caseybrown maximilianh BergmanLab cis-regulatory-evolution
  • Genomic analysis of the relationship between gene expression variation and DNA polymorphism in Drosophila simulans
    Genome Biology, Vol. 9, No. 8. (2008)
    by Mara Lawniczak, Alisha Holloway, David Begun, Corbin Jones
    posted to cis-regulatory flies microarray variation by cisevol on 2008-08-17 23:46:39 as ** along with 3 people and 1 group APRegier caseybrown djkt cis-regulatory-evolution
  • A novel mode of enhancer evolution: The Tal1 stem cell enhancer recruited a MIR element to specifically boost its activity.
    Genome research (7 August 2008)
    by Aileen M M Smith, Maria-Jose J Sanchez, George A A Follows, Sarah Kinston, Ian J J Donaldson, Anthony R R Green, Berthold Göttgens
    posted to cis-regulatory mammals transposon by cisevol on 2008-08-11 19:50:59 as ** along with 2 groups BergmanLab cis-regulatory-evolution
  • Functional Analysis of Gene Duplications in Saccharomyces cerevisiae
    Genetics, Vol. 175, No. 2. (1 February 2007), pp. 933-943.
    by Yuanfang Guan, Maitreya J Dunham, Olga G Troyanskaya
    posted to cis-regulatory duplication fungi by cisevol on 2008-07-22 20:17:40 as ** along with 3 people and 1 group TaqSys csaveanu carlk cis-regulatory-evolution
  • Integration of Horizontally Transferred Genes into Regulatory Interaction Networks Takes Many Million Years
    Mol Biol Evol (24 December 2007), msm283.
    by Martin J Lercher, Csaba Pal
    posted to bacteria cis-regulatory horizontal_transfer by cisevol on 2008-07-12 06:35:01 as ** along with 4 people and 1 group dquest cjeans marcio cambray cis-regulatory-evolution
  • Sepsid even-skipped Enhancers Are Functionally Conserved in Drosophila Despite Lack of Sequence Conservation
    PLoS Genet, Vol. 4, No. 6. (27 June 2008), e1000106.
    by Emily E Hare, Brant K Peterson, Venky N Iyer, Rudolf Meier, Michael B Eisen
    posted to cis-regulatory flies by cisevol on 2008-06-30 21:50:06 as ** along with 7 people and 2 groups maximilianh Stew emptyhb djkt stajich pradiptaray caseybrown Berkeley Mycology cis-regulatory-evolution
  • The words of the regulatory code are arranged in a variable manner in highly conserved enhancers.
    Developmental biology (4 April 2008)
    by Sepand Rastegar, Isabell Hess, Thomas Dickmeis, Jean Christophe C Nicod, Raymond Ertzer, Yavor Hadzhiev, Wolf-Gerolf G Thies, Gerd Scherer, Uwe Strähle
    posted to cis-regulatory vertebrate by cisevol on 2008-06-19 22:33:02 as ** along with 2 people and 1 group maximilianh brant cis-regulatory-evolution
  • Evolutionary changes in gene regulation from a comparative analysis of multiple Drosophila species.
    Genome informatics. International Conference on Genome Informatics, Vol. 18 (2007), pp. 12-21.
    by L Hu, D Segrè, TF Smith
    posted to cis-regulatory flies rearrangement by cisevol on 2008-06-12 21:57:48 as ** along with 1 person and 1 group pradiptaray cis-regulatory-evolution
  • CSMET: Comparative Genomic Motif Detection via Multi-Resolution Phylogenetic Shadowing
    PLoS Comput Biol, Vol. 4, No. 6. (6 June 2008), e1000090.
    by Pradipta Ray, Suyash Shringarpure, Mladen Kolar, Eric P Xing
    posted to cis-regulatory flies model by cisevol on 2008-06-07 21:39:11 as ** along with 3 people and 1 group djkt Stew Ema cis-regulatory-evolution
  • Evolutionary rates and patterns for human transcription factor binding sites derived from repetitive DNA
    BMC Genomics, Vol. 9 (17 May 2008), 226.
    by Nalini Polavarapu, Leonardo Marino-Ramirez, David Landsman, John F Mcdonald, King I Jordan
    posted to cis-regulatory mammals transposon by cisevol on 2008-05-29 22:08:57 as ** along with 2 people and 2 groups pradiptaray bryankr BergmanLab cis-regulatory-evolution
  • Regulatory divergence modifies limb length between mammals
    Genes Dev., Vol. 22, No. 2. (15 January 2008), pp. 141-151.
    by Chris J Cretekos, Ying Wang, Eric D Green, Nisc, James F Martin, John J Rasweiler, Richard R Behringer
    posted to cis-regulatory mammals by cisevol on 2008-05-29 10:25:38 as ** along with 2 people and 1 group carlfulp dchughes cis-regulatory-evolution
  • Co-evolution of transcription factors and their targets depends on mode of regulation
    Genome Biology, Vol. 7 (19 July 2006), R62.
    by Ruth Hershberg, Hanah Margalit
    posted to bacteria cis-regulatory transcription_factor by cisevol on 2008-05-26 11:18:21 as ** along with 4 people and 2 groups indigoviolet dpollard cjeans PetrovLab EisenLab cis-regulatory-evolution
  • Evolutionary origin of regulatory regions of retrogenes in Drosophila
    BMC Genomics, Vol. 9 (22 May 2008), 241.
    by Yongsheng Bai, Claudio Casola, Esther Betran
    posted to cis-regulatory duplication flies transposon by cisevol on 2008-05-25 09:18:46 as ** along with 1 group cis-regulatory-evolution
  • Resurrection of DNA function in vivo from an extinct genome.
    PLoS ONE, Vol. 3, No. 5. (2008)
    by AJ Pask, RR Behringer, MB Renfree
    posted to ancient_dna cis-regulatory mammals by cisevol on 2008-05-23 19:08:52 as ** along with 1 person and 1 group pradiptaray cis-regulatory-evolution
  • Microevolutionary divergence pattern of the segmentation gene hunchback in Drosophila.
    Mol Biol Evol, Vol. 15, No. 11. (November 1998), pp. 1403-1411.
    by D Tautz, L Nigro
    posted to cis-regulatory flies variation by cisevol on 2008-05-23 19:03:28 as ** along with 2 people and 1 group balicea emptyhb cis-regulatory-evolution
  • A test for adaptive change in DNA sequences controlling transcription.
    Proceedings. Biological sciences / The Royal Society, Vol. 261, No. 1361. (22 August 1995), pp. 203-207.
    by DL Jenkins, CA Ortori, JF Brookfield
    posted to cis-regulatory flies variation by cisevol on 2008-05-22 14:18:25 as ** along with 1 group cis-regulatory-evolution
  • Fast Evolution of Core Promoters in Primate Genomes
    Mol Biol Evol, Vol. 25, No. 6. (1 June 2008), pp. 1239-1244.
    by Han Liang, Yeong-Shin Lin, Wen-Hsiung Li
    posted to cis-regulatory mammals by cisevol on 2008-05-18 14:41:37 as ** along with 2 people and 1 group Stew aprasad cis-regulatory-evolution
  • Retrotransposition as a Source of New Promoters.
    Mol Biol Evol (25 March 2008)
    by Kohji Okamura, Kenta Nakai
    posted to cis-regulatory mammals by cisevol on 2008-05-18 14:40:54 as ** along with 3 people and 1 group rschulz clearbluespring inesdesantiago cis-regulatory-evolution
  • Transcription of two human genes from a bidirectional endogenous retrovirus promoter.
    Gene (7 November 2005)
    by Catherine A A Dunn, Mark T T Romanish, Leanne E E Gutierrez, Louie N N van de Lagemaat, Dixie L L Mager
    posted to cis-regulatory mammals transposon by cisevol on 2008-05-16 15:21:46 as ** along with 1 person and 4 groups dchughes G4ID Genetics-of-Gambling BergmanLab cis-regulatory-evolution
  • Retrotransposon Tf1 is targeted to Pol II promoters by transcription activators.
    Molecular cell, Vol. 30, No. 1. (11 April 2008), pp. 98-107.
    by YE Leem, TL Ripmaster, FD Kelly, H Ebina, ME Heincelman, K Zhang, SI Grewal, CS Hoffman, HL Levin
    posted to cis-regulatory expression fungi by cisevol on 2008-05-10 09:06:08 as ** along with 2 groups BergmanLab cis-regulatory-evolution
  • Studying the functional conservation of cis-regulatory modules and their transcriptional output
    BMC Bioinformatics, Vol. 9 (29 April 2008), 220.
    by Denis C Bauer, Timothy L Bailey
    posted to cis-regulatory drosophila model by cisevol on 2008-04-30 19:02:30 as ** along with 2 people and 1 group maximilianh xili03 cis-regulatory-evolution
  • Possible involvement of SINEs in mammalian-specific brain formation.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 105, No. 11. (18 March 2008), pp. 4220-4225.
    by T Sasaki, H Nishihara, M Hirakawa, K Fujimura, M Tanaka, N Kokubo, C Kimura-Yoshida, I Matsuo, K Sumiyama, N Saitou, T Shimogori, N Okada
    posted to cis-regulatory mammals transposon by cisevol on 2008-04-26 19:38:10 as ** along with 1 person and 2 groups FMoncini BergmanLab cis-regulatory-evolution
  • ReXSpecies - a tool for the analysis of the evolution of gene regulation across species
    BMC Evolutionary Biology, Vol. 8 (14 April 2008), 111.
    by Stephan Struckmann, Marcos J Arauzo-Bravo, Hans R Schoeler, Rolland A Reinbold, Georg Fuellen
    posted to cis-regulatory model by cisevol on 2008-04-20 13:27:46 as ** along with 1 person and 1 group maximilianh cis-regulatory-evolution
  • [Reconstruction of ancestral regulatory signals along a transcription factor tree]
    Molekuliarnaia biologiia, Vol. 41, No. 5. (t 2007), pp. 918-925.
    by KIu Gorbunov, VA Liubetskiĭĭ
    posted to bacteria cis-regulatory by cisevol on 2008-04-06 08:00:36 as ** along with 1 person and 1 group pradiptaray cis-regulatory-evolution
  • Weak correlation between sequence conservation in promoter regions and in protein-coding regions of human-mouse orthologous gene pairs
    BMC Genomics, Vol. 9 (02 April 2008), 152.
    by Hirokazu Chiba, Riu Yamashita, Kengo Kinoshita, Kenta Nakai
    posted to cis-regulatory mammals by cisevol on 2008-04-04 20:12:38 as ** along with 1 group cis-regulatory-evolution
  • Impact of Transcription Units rearrangement on the evolution of the regulatory network of gamma-proteobacteria
    BMC Genomics, Vol. 9 (17 March 2008), 128.
    by Abel, Evelyn G Gonzalez, Vladimir E Angarica, Ana, Julio Collado-Vides
    posted to bacteria cis-regulatory by cisevol on 2008-03-20 18:15:11 as ** along with 1 group cis-regulatory-evolution
  • Computation-Based Discovery of Cis-Regulatory Modules by Hidden Markov Model.
    J Comput Biol (11 March 2008)
    by Jing Wu, Jun Xie
    posted to cis-regulatory model by cisevol on 2008-03-13 19:45:10 as ** along with 3 people and 1 group maximilianh csdhwang pradiptaray BergmanLab
  • The Evolution of Gene Regulation Underlies a Morphological Difference between Two Drosophila Sister Species.
    Cell, Vol. 132, No. 5. (7 March 2008), pp. 783-793.
    by S Jeong, M Rebeiz, P Andolfatto, T Werner, J True, SB Carroll
    posted to cis-regulatory flies by cisevol on 2008-03-11 21:52:20 as ** along with 1 person and 1 group Stew cis-regulatory-evolution
  • Links between core promoter and basic gene features influence gene expression
    BMC Genomics, Vol. 9 (25 February 2008), 92.
    by Sandra Moshonov, Rofa Elfakess, Michal Golan-Mashiach, Hadar Sinvani, Rivka Dikstein
    posted to cis-regulatory by cisevol on 2008-02-29 09:36:38 as ** along with 2 groups cis-regulatory-evolution BergmanLab
  • Genetic Properties Influencing the Evolvability of Gene Expression.
    Science (24 May 2007)
    by Christian R R Landry, Bernardo Lemos, Scott A A Rifkin, W J J Dickinson, Daniel L L Hartl
    posted to cis-regulatory fungi microarray by cisevol on 2008-02-18 19:22:19 as ** along with 10 people and 3 groups jjray brant balicea sebastien_vigneau grahamc emarker heliopais caseybrown emptyhb klo EisenLab ParkinsonLab_at_MaRS cis-regulatory-evolution
  • Genome-wide B1 retrotransposon binds the transcription factors dioxin receptor and Slug and regulates gene expression in vivo.
    Proc Natl Acad Sci U S A (25 January 2008)
    by Angel Carlos C Roman, Dixan A A Benitez, Jose M M Carvajal-Gonzalez, Pedro M M Fernandez-Salguero
    posted to cis-regulatory mammals transposon by cisevol on 2008-02-05 21:18:50 as ** along with 1 person and 2 groups maximilianh cis-regulatory-evolution BergmanLab
  • Do Alu repeats shape the primate transcriptome?
    Genome Biology, Vol. 9, No. 2. (2008)
    by Araxi Urrutia, Leandro B Ocana, Laurence Hurst
    posted to cis-regulatory mammals microarray transposon by cisevol on 2008-02-04 22:40:36 as ** along with 4 people and 2 groups djkt biomcgary bpcusack dchughes cis-regulatory-evolution BergmanLab
  • Functional evolution of the p53 regulatory network through its target response elements
    Proceedings of the National Academy of Sciences (10 January 2008), 0704694105.
    by Anil G Jegga, Alberto Inga, Daniel Menendez, Bruce J Aronow, Michael A Resnick
    posted to cis-regulatory mammals by cisevol on 2008-01-30 20:38:40 as ** along with 6 people and 1 group brant cjeans zwang idonaldson renatomilani jyuh cis-regulatory-evolution
  • On the relation between promoter divergence and gene expression evolution
    Mol Syst Biol, Vol. 4 (15 January 2008)
    by Itay Tirosh, Adina Weinberger, Dana Bezalel, Mark Kaganovich, Naama Barkai
    posted to cis-regulatory fungi microarray by cisevol on 2008-01-30 20:35:13 as ** along with 8 people and 2 groups balicea kengg zwang biomcgary caseybrown renatomilani mclarenv Jporci cis-regulatory-evolution BergmanLab
  • Computational discovery of cis-regulatory modules in Drosophila, without prior knowledge of motifs
    Genome Biology, Vol. 9, No. 1. (2008)
    by Andra Ivan, Marc Halfon, Saurabh Sinha
    posted to cis-regulatory flies model by cisevol on 2008-01-30 14:21:23 as ** along with 2 people and 1 group maximilianh csdhwang cis-regulatory-evolution
  • Evaluation of phylogenetic footprint discovery for predicting bacterial cis-regulatory elements and revealing their evolution
    BMC Bioinformatics, Vol. 9 (23 January 2008), 37.
    by Rekin's Janky, Jacques van Helden
    posted to bacteria cis-regulatory model by cisevol on 2008-01-28 09:40:49 as ** along with 1 person and 1 group xili03 cis-regulatory-evolution
  • Human cis natural antisense transcripts initiated by transposable elements.
    Trends Genet (11 January 2008)
    by Andrew B B Conley, Wolfgang J J Miller, I King K Jordan
    posted to cis-regulatory mammals transposon by cisevol on 2008-01-20 22:36:40 as ** along with 6 people and 2 groups gpappas balicea dchughes sebastien_vigneau timflutre yoanjacquemin cis-regulatory-evolution BergmanLab
  • Transcriptional Regulation of Pituitary POMC Is Conserved at the Vertebrate Extremes Despite Great Promoter Sequence Divergence
    Mol Endocrinol, Vol. 21, No. 11. (1 November 2007), pp. 2738-2749.
    by Viviana F Bumaschny, Flavio S de Souza, Lopez, Andrea M Santangelo, Manfred Baetscher, Diego H Levi, Malcolm J Low, Marcelo Rubinstein
    posted to cis-regulatory vertebrate by cisevol on 2008-01-14 15:41:28 as ** along with 1 person and 1 group maximilianh cis-regulatory-evolution
  • Evolution of alternative transcriptional circuits with identical logic
    Nature, Vol. 443, No. 7110. (2006), pp. 415-420.
    by Annie E Tsong, Brian B Tuch, Hao Li, Alexander D Johnson
    posted to cis-regulatory fungi by cisevol on 2008-01-12 15:13:22 as ** along with 6 people and 4 groups marcius brant adepace aswin srfairclough emptyhb EisenLab BioinfoCIPF SGU-CIPF cis-regulatory-evolution
  • Evolution of a combinatorial transcriptional circuit: a case study in yeasts.
    Cell, Vol. 115, No. 4. (14 November 2003), pp. 389-399.
    by AE Tsong, MG Miller, RM Raisner, AD Johnson
    posted to cis-regulatory fungi by cisevol on 2008-01-12 15:12:46 as ** along with 1 group cis-regulatory-evolution
  • Coordinated evolution of co-expressed gene clusters in the Drosophila transcriptome
    BMC Evolutionary Biology, Vol. 8 (07 January 2008), 2.
    by Jason G Mezey, Sergey V Nuzhdin, Fangfei Ye, Corbin D Jones
    posted to cis-regulatory flies microarray by cisevol on 2008-01-09 21:40:07 as ** along with 1 group cis-regulatory-evolution
  • Evolution of functionally conserved enhancers can be accelerated in large populations: a population-genetic model.
    Proc Biol Sci, Vol. 269, No. 1494. (7 May 2002), pp. 953-960.
    by AJ Carter, GP Wagner
    posted to cis-regulatory model by cisevol on 2007-12-15 13:35:20 as ** along with 1 person and 1 group emptyhb cis-regulatory-evolution
  • Genome-wide changes in expression profile of murine endogenous retroviruses (MuERVs) in distant organs after burn injury
    BMC Genomics, Vol. 8 (28 November 2007), 440.
    by Young-Kwan Lee, Alex Chew, Lauren Fitzsimon, Rita Thomas, David Greenhalgh, Kiho Cho
    posted to cis-regulatory transposon by cisevol on 2007-12-03 11:16:30 as ** along with 1 group BergmanLab
  • A transposable element inserted just 5' to a Drosophila glue protein gene alters gene expression and chromatin structure.
    Cell, Vol. 34, No. 1. (August 1983), pp. 75-84.
    by W McGinnis, AW Shermoen, SK Beckendorf
    posted to cis-regulatory flies transposon by cisevol on 2007-12-01 16:48:38 as ** along with 2 groups cis-regulatory-evolution BergmanLab
  • Multiple independent evolutionary solutions to core histone gene regulation
    Genome Biology, Vol. 7 (21 December 2006), R122.
    by Leonardo Marino-Ramirez, King I Jordan, David Landsman
    posted to cis-regulatory duplication by cisevol on 2007-11-26 08:32:18 as ** along with 1 group cis-regulatory-evolution
  • Conserved eukaryotic transposable elements and the evolution of gene regulation.
    Cell Mol Life Sci (20 November 2007)
    by J Jurka
    posted to cis-regulatory mammals noncoding transposon by cisevol on 2007-11-22 15:36:43 as ** along with 5 people and 2 groups gpappas dchughes Stew maximilianh idonaldson cis-regulatory-evolution BergmanLab
  • Repeated Recruitment of LTR Retrotransposons as Promoters by the Anti-Apoptotic Locus NAIP during Mammalian Evolution
    PLoS Genetics, Vol. 3, No. 1. (1 January 2007), e10.
    by Mark T Romanish, Wynne M Lock, Louie N de Lagemaat, Catherine A Dunn, Dixie L Mager
    posted to cis-regulatory mammals transposon by cisevol on 2007-11-01 10:55:08 as ** along with 3 people and 4 groups dchughes Fei yoanjacquemin G4ID Genetics-of-Gambling cis-regulatory-evolution BergmanLab
  • Using Reporter Gene Assays to Identify cis Regulatory Differences Between Humans and Chimpanzees
    Genetics, Vol. 176, No. 4. (1 August 2007), pp. 2069-2076.
    by Adrien Chabot, Ralla A Shrit, Ran Blekhman, Yoav Gilad
    posted to cis-regulatory mammals by cisevol on 2007-10-29 22:17:27 as ** along with 1 person and 1 group mimulus_99 cis-regulatory-evolution
  • Identification of conserved domains in the promoter regions of nitric oxide synthase 2: implications for the species-specific transcription and evolutionary differences
    BMC Genomics, Vol. 8 (08 August 2007), 271.
    by Daniel Rico, Juan M Vaquerizas, Hernan Dopazo, Lisardo Bosca
    posted to cis-regulatory mammals by cisevol on 2007-10-29 13:52:22 as ** along with 1 group cis-regulatory-evolution
  • Whole-genome cartography of estrogen receptor alpha binding sites.
    PLoS Genet, Vol. 3, No. 6. (June 2007)
    by CY Lin, VB Vega, JS Thomsen, T Zhang, SL Kong, M Xie, KP Chiu, L Lipovich, DH Barnett, F Stossi, A Yeo, J George, VA Kuznetsov, YK Lee, TH Charn, N Palanisamy, LD Miller, E Cheung, BS Katzenellenbogen, Y Ruan, G Bourque, CL Wei, ET Liu
    posted to cis-regulatory mammals by cisevol on 2007-10-27 16:08:12 as ** along with 2 people and 1 group jfr vega cis-regulatory-evolution
    • Remarque: pour citer cette page, utilisez l'url suivante: http://www.citeulike.org/user/cisevol/tag/cis-regulatory

    Result page: 1 2 3 4 Next RIS BibTeX
    CiteULike organises scholarly (or academic) papers or literature and provides bibliographic (which means it makes bibliographies) for universities and higher education establishments. It helps undergraduates and postgraduates. People studying for PhDs or in postdoctoral (postdoc) positions. The service is similar in scope to EndNote or RefWorks or any other reference manager like BibTeX, but it is a social bookmarking service for scientists and humanities researchers.