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de fhsantanna library [100 articles]

Articles dernièrement stockés dans la bibliothèque de fhsantanna .
  • Complete genome structure of Gloeobacter violaceus PCC 7421, a cyanobacterium that lacks thylakoids.
    DNA Res, Vol. 10, No. 4. (31 August 2003), pp. 137-145.
    by Y Nakamura, T Kaneko, S Sato, M Mimuro, H Miyashita, T Tsuchiya, S Sasamoto, A Watanabe, K Kawashima, Y Kishida, C Kiyokawa, M Kohara, M Matsumoto, A Matsuno, N Nakazaki, S Shimpo, C Takeuchi, M Yamada, S Tabata
    posted to paperpii by fhsantanna on 2008-09-05 21:19:01 as ** along with 1 person and 2 groups jwm Radiation_Damage Stressosome
  • The neighbor-joining method: a new method for reconstructing phylogenetic trees
    Molecular Biology and Evolution, Vol. 4, No. 4. (1987), pp. 406-425.
    by N Saitou
    posted to file-import-08-09-05 by fhsantanna on 2008-09-05 21:09:15 as **
  • Confidence intervals on phylogenies: an approach using the bootstrap
    Evolution, Vol. 39 (1985), pp. 783-791.
    by J Felsenstein
    posted to file-import-08-09-05 by fhsantanna on 2008-09-05 21:07:53 as **
  • Evolutionary divergence and convergence in proteins
    (1965), pp. 97-166.
    by E Zuckerkandl, L Pauling
    edited by V Bryson, HJ Vogel
    posted to proteins poisson phylogeny paperpii by fhsantanna on 2008-09-05 21:07:07 as **
  • PHYML Online--a web server for fast maximum likelihood-based phylogenetic inference.
    Nucleic acids research, Vol. 33, No. Web Server issue. (1 July 2005)
    by S Guindon, F Lethiec, P Duroux, O Gascuel
    posted to phyml phylogeny online maximum likelihood by fhsantanna on 2008-09-05 20:42:02 as **
  • GeneDoc: analysis and visualization of genetic variation
    EMBNEW. NEWS, Vol. 4 (1997)
    by KB Nicholas, HB Nicholas, DW Deerfield
    posted to file-import-08-09-05 by fhsantanna on 2008-09-05 20:39:06 as **
  • Reversible membrane association of dinitrogenase reductase activating glycohydrolase in the regulation of nitrogenase activity in Rhodospirillum rubrum; dependence on GlnJ and AmtB1.
    FEMS microbiology letters, Vol. 253, No. 2. (15 December 2005), pp. 273-279.
    by H Wang, CC Franke, S Nordlund, A Norén
    posted to rhodospirillum paperpii glnj drag amtb1 amtb by fhsantanna on 2008-09-05 19:16:32 as **
  • EMBOSS: the European Molecular Biology Open Software Suite.
    Trends Genet, Vol. 16, No. 6. (June 2000), pp. 276-277.
    by P Rice, I Longden, A Bleasby
    posted to software paperpii emboss by fhsantanna on 2008-09-05 17:59:55 as ** along with 5 people chad_davis dullhunk mtagaya dgront dna
  • MUSCLE: multiple sequence alignment with high accuracy and high throughput.
    Nucleic Acids Res, Vol. 32, No. 5. (2004), pp. 1792-1797.
    by RC Edgar
    posted to sequence paperpii muscle clustal alignment by fhsantanna on 2008-09-05 17:58:46 as ** along with 16 people and 2 groups nachtalp bpb chrn jwm Haggan sanchezbuelna timflutre olympos martainn edvin newton1234 skumagai bmaust sconlan dmp kcrawlik Radiation_Damage Stressosome
  • Differential gene expression during interactions between Heterobasidion annosum and Physisporinus sanguinolentus
    FEMS Microbiology Letters, Vol. 241, No. 1. (1 December 2004), pp. 79-85.
    by Andrei Iakovlev, Ake Olson, Malin Elfstrand, Jan Stenlid
    posted to dilution rt-pcr semiquantitative by fhsantanna on 2008-08-12 20:22:54 as **
  • Ancient horizontal gene transfer
    Nat Rev Genet, Vol. 4, No. 2. (February 2003), pp. 121-132.
    by James R Brown
    posted to ancient hgt review by fhsantanna on 2008-08-06 03:11:33 as **
  • Bacterial evolution.
    Microbiological reviews, Vol. 51, No. 2. (June 1987), pp. 221-271.
    by CR Woese
    posted to no-tag by fhsantanna on 2008-07-30 23:04:29 as **
  • On the nature of fur evolution: a phylogenetic approach in Actinobacteria
    BMC Evolutionary Biology, Vol. 8 (25 June 2008), 185.
    by Catarina L Santos, Joao Vieira, Fernando Tavares, David R Benson, Louis S Tisa, Alison M Berry, Pedro Moradas-Ferreira, Philippe Normand
    posted to evolution fur phylogeny syntheny by fhsantanna on 2008-07-30 15:09:09 as ** along with 1 person Retchless
  • Myosin domain evolution and the primary divergence of eukaryotes
    Nature, Vol. 436, No. 7054., pp. 1113-1118.
    by Thomas A Richards, Thomas Cavalier-Smith
    posted to evolution methods myosin by fhsantanna on 2008-07-30 13:42:13 as ** along with 1 person and 1 group jdelcampo Microbial-Ecology
  • The evolutionary history of nitrogen fixation, as assessed by NifD.
    Journal of molecular evolution, Vol. 58, No. 4. (April 2004), pp. 390-399.
    by BJ Henson, LE Watson, SR Barnum
    posted to evolution nifd nitrogenase by fhsantanna on 2008-07-30 02:20:41 as **
  • Modified RP4 and Tn5-Mob derivatives for facilitated manipulation of large plasmids in Gram-negative bacteria
    Plasmid, Vol. 52, No. 1. (July 2004), pp. 1-12.
    by Jürgen Quandt, Rhonda G Clark, Alexandra P Venter, Scott R Clark, Sunny Twelker, Michael F Hynes
    posted to plasmid rp4 tn5 vector by fhsantanna on 2008-07-23 16:24:12 as ** along with 1 person shana
  • Physical organization and phylogenetic analysis of acdR as leucine-responsive regulator of the 1-aminocyclopropane-1-carboxylate deaminase gene acdS in phytobeneficial Azospirillum lipoferum 4B and other Proteobacteria
    FEMS Microbiology Ecology, Vol. 0, No. 0. (0), pp. ???-???.
    by Claire P Combaret, Didier Blaha, Joel F Pothier, Ludovic Vial, Marie A Poirier, Florence W Dye, Yvan M Loccoz
    posted to acc acds rt-pcr by fhsantanna on 2008-07-21 21:11:10 as ***** along with 1 group Azospirillum
  • Selection for gene clustering by tandem duplication.
    Annu Rev Microbiol, Vol. 58 (2004), pp. 119-142.
    by AB Reams, EL Neidle
    posted to clustering duplication evolution gene tandem by fhsantanna on 2008-07-15 20:14:20 as ** along with 1 person rabu
  • Order and disorder in bacterial genomes.
    Curr Opin Microbiol, Vol. 7, No. 5. (October 2004), pp. 519-527.
    by EP Rocha
    posted to disorder genome order organization plasticity rearrangements by fhsantanna on 2008-07-15 19:58:39 as ** along with 1 person treangen
  • From gene trees to organismal phylogeny in prokaryotes: the case of the gamma-Proteobacteria.
    PLoS Biol, Vol. 1, No. 1. (October 2003)
    by E Lerat, V Daubin, NA Moran
    posted to gamma gebe hgt phylogeny tree by fhsantanna on 2008-07-15 17:47:26 as ** along with 3 people knaseanka AaronDarling treangen
  • Regulation of AmtR-controlled gene expression in Corynebacterium glutamicum: mechanism and characterization of the AmtR regulon
    Molecular Microbiology, Vol. 58, No. 2. (October 2005), pp. 580-595.
    by Gabriele Beckers, Julia Strosser, Ulrich Hildebrandt, Jorn Kalinowski, Mike Farwick, Reinhard Kramer, Andreas Burkovski
    posted to actinobacteria amtb amtr corynebacterium glnd pii by fhsantanna on 2008-07-14 18:23:18 as **
  • The GlnD and GlnK homologues of Streptomyces coelicolor A3(2) are functionally dissimilar to their nitrogen regulatory system counterparts from enteric bacteria.
    Molecular microbiology, Vol. 46, No. 2. (October 2002), pp. 319-330.
    by A Hesketh, D Fink, B Gust, HU Rexer, B Scheel, K Chater, W Wohlleben, A Engels
    posted to actinobacteria coelicolor glnd glnk streptomyces by fhsantanna on 2008-07-14 18:15:29 as **
  • Key role of bacterial NH(4)(+) metabolism in Rhizobium-plant symbiosis.
    Microbiology and molecular biology reviews : MMBR, Vol. 66, No. 2. (June 2002), pp. 203-222.
    by EJ Patriarca, R Tatè, M Iaccarino
    posted to ammonia metabolism nitrogen nitrogenase pii rhizobium by fhsantanna on 2008-07-14 13:38:02 as **
  • Gene function analysis in environmental isolates: the nif regulon of the strict iron oxidizing bacterium Leptospirillum ferrooxidans.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 100, No. 13. (24 June 2003), pp. 7883-7888.
    by V Parro, M Moreno-Paz
    posted to ferrooxidans leprospirillum microarray nadh nif nitrogen nitrospirae oxidoreductase pii starvation stress by fhsantanna on 2008-07-11 19:57:47 as *****
  • Evolution of microbial virulence: the benefits of stress.
    Trends in genetics : TIG, Vol. 23, No. 6. (June 2007), pp. 293-300.
    by DL Arnold, RW Jackson, NR Waterfield, JW Mansfield
    posted to evolution genome microbial stress virulence by fhsantanna on 2008-07-10 20:21:33 as ** along with 1 person manzanita
  • Convergent evolution of clustering of Iroquois homeobox genes across metazoans.
    Molecular biology and evolution (9 May 2008)
    by Manuel Irimia, Ignacio Maeso, Jordi Garcia-Fernàndez
    posted to clustering convergent evolution gene by fhsantanna on 2008-07-10 19:47:38 as ***** along with 1 person maximilianh
  • Homoplasy, homology and the problem of 'sameness' in biology.
    Novartis Foundation symposium, Vol. 222 (1999)
    by DB Wake
    posted to homology homoplasy by fhsantanna on 2008-07-10 19:32:16 as **
  • Ancient horizontal gene transfer can benefit phylogenetic reconstruction
    Trends in Genetics, Vol. 22, No. 7. (July 2006), pp. 361-366.
    by Jinling Huang, Johann P Gogarten
    posted to ancient hgt phylogeny by fhsantanna on 2008-07-09 20:35:03 as ** along with 2 groups FAB-lab SFUAntibodyResearch
  • Genome mosaicism and organismal lineages
    Trends in Genetics, Vol. 20, No. 5. (01 May 2004), pp. 254-260.
    by Olga Zhaxybayeva, Pascal Lapierre, Peter P Gogarten
    posted to bacteria genome hgt lineages mosaicism phylogeny by fhsantanna on 2008-07-09 20:28:33 as ** along with 2 people operon labedan
  • Towards a prokaryotic genomic taxonomy.
    FEMS Microbiol Rev, Vol. 29, No. 2. (April 2005), pp. 147-167.
    by T Coenye, D Gevers, Y Van de Peer, P Vandamme, J Swings
    posted to genome hgt prokaryotic taxonomy by fhsantanna on 2008-07-09 20:26:11 as ***** along with 1 person and 1 group jdelcampo Microbial-Ecology
  • Molecular evolution of the nif gene cluster carrying nifI1 and nifI2 genes in the Gram-positive phototrophic bacterium Heliobacterium chlorum
    Int J Syst Evol Microbiol, Vol. 56, No. 1. (1 January 2006), pp. 65-74.
    by Jigjiddorj Enkh-Amgalan, Hiroko Kawasaki, Tatsuji Seki
    posted to evolution heliobacterium nifi nitrogenase by fhsantanna on 2008-07-08 19:58:56 as *****
  • Complex formation between AmtB and GlnK: an ancestral role in prokaryotic nitrogen control.
    Biochemical Society transactions, Vol. 33, No. Pt 1. (February 2005), pp. 170-172.
    by A Javelle, M Merrick
    posted to amtb evolution glnb glnk pii by fhsantanna on 2008-07-08 18:01:26 as **
  • The origin and evolution of model organisms.
    Nat Rev Genet, Vol. 3, No. 11. (November 2002), pp. 838-849.
    by SB Hedges
    posted to evolution life model organisms phylogeny tree by fhsantanna on 2008-07-03 21:36:33 as ** along with 2 people winterschlaefer bpcusack
  • Homology assessment and molecular sequence alignment
    Journal of Biomedical Informatics, Vol. 39, No. 1. (February 2006), pp. 18-33.
    by Aloysius J Phillips
    posted to homology phylogeny review by fhsantanna on 2008-07-02 23:50:02 as **
  • Repeatability of clades as a criterion of reliability: a case study for molecular phylogeny of Acanthomorpha (Teleostei) with larger number of taxa
    Molecular Phylogenetics and Evolution, Vol. 26, No. 2. (February 2003), pp. 262-288.
    by Wei-Jen Chen, Céline Bonillo, Guillaume Lecointre
    posted to congruence evolution phylogeny reliability repeatability by fhsantanna on 2008-07-02 23:38:55 as **
  • Interpreting the universal phylogenetic tree.
    Proc Natl Acad Sci U S A, Vol. 97, No. 15. (18 July 2000), pp. 8392-8396.
    by CR Woese
    posted to bacteria eukarya evolution phylogeny prokaryote tree universal by fhsantanna on 2008-07-02 14:41:35 as ** along with 4 people bayesian ykadi gulsacan hdsskin
  • Searching for the common ancestor.
    Research in microbiology, Vol. 151, No. 2. (March 2000), pp. 85-89.
    by RF Doolittle
    posted to ancestor archaea bacteria evolution by fhsantanna on 2008-07-02 14:39:24 as **
  • On the evolution of cells
    PNAS, Vol. 99, No. 13. (25 June 2002), pp. 8742-8747.
    by Carl R Woese
    posted to archaea bacteria cells evolution by fhsantanna on 2008-07-02 14:35:53 as ***** along with 2 people gulsacan FMoncini
  • Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 87, No. 12. (June 1990), pp. 4576-4579.
    by CR Woese, O Kandler, ML Wheelis
    posted to archaea bacteria eukarya life of tree by fhsantanna on 2008-07-02 04:59:38 as **
  • Evolution of glutamine synthetase genes is in accordance with the neutral theory of molecular evolution.
    Idengaku zasshi, Vol. 69, No. 5. (October 1994), pp. 489-502.
    by Y Tateno
    posted to evolution glutamine neutral synthetase theory by fhsantanna on 2008-07-02 04:50:28 as *****
  • Evolutionary conservation and diversification of Rh family genes and proteins
    Proceedings of the National Academy of Sciences, Vol. 102, No. 43. (25 October 2005), pp. 15512-15517.
    by Cheng-Han Huang, Jianbin Peng
    posted to amtb evolution rh by fhsantanna on 2008-07-02 04:42:08 as **
  • Rh proteins vs Amt proteins: an organismal and phylogenetic perspective on CO2 and NH3 gas channels.
    Transfusion clinique et biologique : journal de la Société française de transfusion sanguine, Vol. 13, No. 1-2. (r 2006), pp. 85-94.
    by J Peng, CH Huang
    posted to ammonia amtb channel evolution nh3 review rh by fhsantanna on 2008-07-02 04:36:15 as *****
  • Plasmid transformation of Bacteroides spp. by electroporation.
    Plasmid, Vol. 24, No. 2. (September 1990), pp. 100-109.
    by CJ Smith, A Parker, MB Rogers
    posted to bacteroides electroporation electrotransformation pbi121 pbin19 plasmid transformation by fhsantanna on 2008-06-27 04:35:01 as **
  • Electroporation and conjugal plasmid transfer to members of the genus Aquaspirillum.
    Archives of microbiology, Vol. 155, No. 5. (1991), pp. 449-452.
    by PA Eden, RP Blakemore
    posted to aquaspirillum electroporation electrotransformation rk2 transformation by fhsantanna on 2008-06-27 04:33:40 as **
  • Mobilization function of the pBHR1 plasmid, a derivative of the broad-host-range plasmid pBBR1.
    Journal of bacteriology, Vol. 183, No. 6. (March 2001), pp. 2101-2110.
    by CY Szpirer, M Faelen, M Couturier
    posted to origin pbbr1 pbbr1mcs pbhr1 plasmid replicon small vector by fhsantanna on 2008-06-26 21:09:49 as **
  • In Vivo and in Vitro Stability of the Broad-Host-Range Cloning Vector pBBR1MCS in Six Brucella Species
    Plasmid, Vol. 33, No. 1. (January 1995), pp. 51-57.
    by Philip H Elzer, Michael E Kovach, Robert W Phillips, Gregory T Robertson, Kenneth M Peterson, Martin R Roop
    posted to brucella electroporation electrotransformation pbbr1mcs transformation by fhsantanna on 2008-06-26 02:52:11 as **
  • Four new derivatives of the broad-host-range cloning vector pBBR1MCS, carrying different antibiotic-resistance cassettes.
    Gene, Vol. 166, No. 1. (1 December 1995), pp. 175-176.
    by ME Kovach, PH Elzer, DS Hill, GT Robertson, MA Farris, RM Roop, KM Peterson
    posted to broad host pbbr1mcs plasmid rk2 vector by fhsantanna on 2008-06-26 02:37:40 as **
  • Assaying chimeric genes in plants: The GUS gene fusion system
    Plant Molecular Biology Reporter, Vol. 5, No. 4. (14 December 1987), pp. 387-405.
    by Richard Jefferson
    posted to agrobacterium gus kanamycin pbi121 pbin19 resistance by fhsantanna on 2008-06-25 20:17:24 as **
  • Efficient transformation of Agrobacterium spp. by electroporation.
    Nucleic acids research, Vol. 17, No. 16. (25 August 1989)
    by D Mattanovich, F Rüker, AC Machado, M Laimer, F Regner, H Steinkellner, G Himmler, H Katinger
    posted to agrobacterium electroporation electrotransformation plasmid protocol transformation by fhsantanna on 2008-06-25 18:17:32 as **
  • High efficiency transformation of E. coli by high voltage electroporation.
    Nucleic acids research, Vol. 16, No. 13. (11 July 1988), pp. 6127-6145.
    by WJ Dower, JF Miller, CW Ragsdale
    posted to coli electroporation electrotransformation escherichia transformation by fhsantanna on 2008-06-25 17:49:03 as **
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