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de madhadron evolution [61 articles]

Recent papers added to de madhadron library classified by the tag evolution. You can also see everyone's evolution.
  • Pathogenicity islands and phages in Vibrio cholerae evolution.
    Trends in microbiology, Vol. 11, No. 11. (November 2003), pp. 505-510.
    by SM Faruque, JJ Mekalanos
    posted to phage evolution cholera by madhadron on 2008-06-01 13:50:48 as **
  • The Four Basic Mechanisms of Fitness and Complexity Increase in Evolution
    (10 May 2008)
    by Yong Fu
    posted to evolution by madhadron on 2008-05-13 11:35:30 as ***
  • notes Evolution of the genetic code. From the CG- to the CGUA-alphabet, from RNA double helix to DNA
    (5 May 2008)
    by Denis A Semenov
    posted to evolution dna by madhadron on 2008-05-07 08:56:50 as read
  • The Evolutionary and Developmental Foundations of Mathematics
    PLoS Biology, Vol. 6, No. 2. (1 February 2008), e19.
    by Michael J Beran
    posted to biology evolution mathematics by madhadron on 2008-03-10 10:53:10 as **** along with 3 people djkt biehl psique
  • Cladogenesis, coalescence and the evolution of the three domains of life
    Trends in Genetics, Vol. 20, No. 4. (April 2004), pp. 182-187.
  • Coevolved Crypts and Exocrine Glands Support Mutualistic Bacteria in Fungus-Growing Ants
    Science, Vol. 311, No. 5757. (6 January 2006), pp. 81-83.
    by Cameron R Currie, Michael Poulsen, John Mendenhall, Jacobus J Boomsma, Johan Billen
  • Chimpanzees Are Rational Maximizers in an Ultimatum Game
    Science, Vol. 318, No. 5847. (5 October 2007), pp. 107-109.
    by Keith Jensen, Josep Call, Michael Tomasello
  • Genetic regulatory mechanisms and the ecological niche of Escherichia coli.
    Proc Natl Acad Sci U S A, Vol. 71, No. 6. (June 1974), pp. 2453-2455.
    by MA Savageau
    posted to evolution genetics by madhadron on 2007-11-13 16:31:14 as **
  • On the origin of leprosy.
    Science, Vol. 308, No. 5724. (13 May 2005), pp. 1040-1042.
    by M Monot, N Honoré, T Garnier, R Araoz, JY Coppée, C Lacroix, S Sow, JS Spencer, RW Truman, DL Williams, R Gelber, M Virmond, B Flageul, SN Cho, B Ji, A Paniz-Mondolfi, J Convit, S Young, PE Fine, V Rasolofo, PJ Brennan, ST Cole
    posted to epidemiology evolution mleprae by madhadron on 2007-10-31 10:26:02 as **** along with 2 people misc8g cmmorel
  • Fluctuation induces evolutionary branching in a modeled microbial ecosystem
    (22 Oct 2007)
    by Masashi Tachikawa
    posted to evolution by madhadron on 2007-10-23 08:36:34 as ***
  • Evolution of Complexity
    (19 Oct 2007)
    by Carlos Gershenson, Tom Lenaerts
    posted to complexity evolution by madhadron on 2007-10-23 08:34:32 as ** along with 1 person Koh
  • Spontaneous Emergence of Modularity in a Model of Evolving Individuals
    (18 Oct 2007)
    by Jun Sun, Michael W Deem
    posted to evolution modularity by madhadron on 2007-10-19 08:31:47 as ***** along with 2 people Koh RandyRR
  • The look-ahead effect of phenotypic mutations
    (15 Oct 2007)
    by Dion J Whitehead, Claus O Wilke, David Vernazobres, Erich Bornberg-Bauer
    posted to evolution mutation by madhadron on 2007-10-16 10:41:55 as **
  • Localizing Recent Adaptive Evolution in the Human Genome
    PLoS Genetics, Vol. 3, No. 6. (1 June 2007), e90.
    by Scott H Williamson, Melissa J Hubisz, Andrew G Clark, Bret A Payseur, Carlos D Bustamante, Rasmus Nielsen
  • Global landscape of recent inferred Darwinian selection for Homo sapiens
    PNAS, Vol. 103, No. 1. (3 January 2006), pp. 135-140.
    by Eric T Wang, Greg Kodama, Pierre Baldi, Robert K Moyzis
  • A New Approach for Using Genome Scans to Detect Recent Positive Selection in the Human Genome.
    PLoS Biol, Vol. 5, No. 7. (19 June 2007)
    by Kun Tang, Kevin R R Thornton, Mark Stoneking
  • A Map of Recent Positive Selection in the Human Genome.
    PLoS Biol, Vol. 4, No. 3. (7 March 2006)
    by Benjamin F F Voight, Sridhar Kudaravalli, Xiaoquan Wen, Jonathan K K Pritchard
  • Localizing Recent Adaptive Evolution in the Human Genome
    PLoS Genetics, Vol. 3, No. 6. (1 June 2007), e90.
    by Scott H Williamson, Melissa J Hubisz, Andrew G Clark, Bret A Payseur, Carlos D Bustamante, Rasmus Nielsen
  • A comprehensive view on proteasomal sequences: implications for the evolution of the proteasome.
    J Mol Biol, Vol. 326, No. 5. (7 March 2003), pp. 1437-1448.
    posted to evolution newtrp proteasome by madhadron on 2007-09-29 14:23:42 as ** along with 2 people zhlei leemary4
  • Sea anemone genome reveals ancestral eumetazoan gene repertoire and genomic organization.
    Science, Vol. 317, No. 5834. (6 July 2007), pp. 86-94.
  • The origin of modern metabolic networks inferred from phylogenomic analysis of protein architecture
    PNAS, Vol. 104, No. 22. (29 May 2007), pp. 9358-9363.
    by Gustavo Caetano-Anolles, Hee S Kim, Jay E Mittenthal
    posted to evolution metabolism by madhadron on 2007-07-15 17:02:51 as ** along with 1 person fishtank
  • The Hypercube of Life: How Protein Stability Imposes Limits on Organism Complexity and Speed of Molecular Evolution
    (28 May 2007)
    by Konstantin Zeldovich, Peiqiu Chen, Eugene Shakhnovich
    posted to evolution protein thermodynamics by madhadron on 2007-07-07 15:43:20 as **
  • Dissemination of the strA-strB streptomycin-resistance genes among commensal and pathogenic bacteria from humans, animals, and plants.
    Mol Ecol, Vol. 5, No. 1. (February 1996), pp. 133-143.
    by GW Sundin, CL Bender
    posted to antibiotic evolution genetransfer resistance streptomycin by madhadron on 2007-04-11 16:26:38 as **
  • Horizontal gene transfer in prokaryotes: quantification and classification.
    Annu Rev Microbiol, Vol. 55 (2001), pp. 709-742.
    by EV Koonin, KS Makarova, L Aravind
  • Towards a physics of evolution: Existence of gales of creative deconstruction in evolving technological networks
    (8 Mar 2007)
    by Rudolf Hanel, Stuart A Kauffman, Stefan Thurner
    posted to evolution by madhadron on 2007-03-16 21:28:48 as **** along with 1 person jjray
  • Evolutionary mechanisms of persistence and diversification of a calicivirus within endemically infected natural host populations.
    J Virol, Vol. 81, No. 4. (February 2007), pp. 1961-1971.
    by KP Coyne, RM Gaskell, S Dawson, CJ Porter, AD Radford
    posted to evolution persistence viruses by madhadron on 2007-03-16 13:18:30 as **
  • Evolution of Robustness to Noise and Mutation in Gene Expression Dynamics
    (2 Mar 2007)
    by Kunihiko Kaneko
    posted to evolution genetics robustness by madhadron on 2007-03-08 14:29:46 as ***
  • The Generation of New Protein Functions by the Combination of Domains
    Structure, Vol. 15, No. 1. (January 2007), pp. 85-99.
    by Matthew Bashton, Cyrus Chothia
  • Evolution of an obligate social cheater to a superior cooperator
    Nature, Vol. 441, No. 7091. (18 May 2006), pp. 310-314.
    by Francesca Fiegna, Yuen-Tsu N Yu, Supriya V Kadam, Gregory J Velicer
  • Competition in size-structured populations: mechanisms inducing cohort formation and population cycles
    Theoretical Population Biology, Vol. 63, No. 1. (February 2003), pp. 1-16.
    by AM de Roos, L Persson
    posted to evolution by madhadron on 2006-11-21 17:39:03 as ** along with 1 person tomrevilla
  • Evolution of cooperation by multilevel selection
    PNAS, Vol. 103, No. 29. (18 July 2006), pp. 10952-10955.
    by Arne Traulsen, Martin A Nowak
  • The group covariance effect and fitness trade-offs during evolutionary transitions in individuality
    PNAS, Vol. 103, No. 24. (13 June 2006), pp. 9113-9117.
    by Richard E Michod
    posted to evolution by madhadron on 2006-11-21 17:37:19 as ** along with 1 person and 1 group brettc evo-devo
  • How Phenotypic Variation and Life History Trait Correlation Enhance Mean Fitness in Prey Populations
    Theoretical Population Biology, Vol. 54, No. 1. (August 1998), pp. 50-61.
    by Laura Hartt, James W Haefner
    posted to evolution by madhadron on 2006-11-21 17:36:35 as **
  • Fluctuation in the physical environment as a mechanism for reinforcing evolutionary transitions
    Journal of Theoretical Biology, Vol. 242, No. 4. (21 October 2006), pp. 832-843.
    by Richard A Boyle, Timothy M Lenton
    posted to evolution by madhadron on 2006-11-21 17:36:13 as ** along with 1 person jimmithy
  • Evidence for phylogenetic inheritance in pathogenicity of Mycobacterium.
    Antonie Van Leeuwenhoek, Vol. 83, No. 3. (2003), pp. 265-274.
    by MC Leclerc, F Thomas, JF Guégan
    posted to evolution mycobacteria phylogeny by madhadron on 2006-11-09 01:08:09 as **
  • The origin and evolution of Mycobacterium tuberculosis.
    Clin Chest Med, Vol. 26, No. 2. (June 2005)
    by S Mostowy, MA Behr
    posted to evolution mtuberculosis by madhadron on 2006-11-01 14:03:13 as **
  • Inferring the pattern of spontaneous mutation from the pattern of substitution in unitary pseudogenes of Mycobacterium leprae and a comparison of mutation patterns among distantly related organisms.
    J Mol Evol, Vol. 61, No. 6. (December 2005), pp. 795-803.
    by A Mitchell, D Graur
    posted to evolution mycobacteria by madhadron on 2006-11-01 13:59:10 as ****
  • Ecotypes of the Mycobacterium tuberculosis complex.
    J Theor Biol, Vol. 239, No. 2. (21 March 2006), pp. 220-225.
    by NH Smith, K Kremer, J Inwald, J Dale, JR Driscoll, SV Gordon, D van Soolingen, RG Hewinson, JM Smith
    posted to evolution mycobacteria phylogeny by madhadron on 2006-11-01 13:58:35 as ****
  • Pathogeny of archaic mycobacteria at the emergence of urban life in Egypt (3400 BC).
    Infect Genet Evol, Vol. 6, No. 1. (January 2006), pp. 13-21.
    by E Crubézy, L Legal, G Fabas, H Dabernat, B Ludes
    posted to evolution mycobacteria phylogeny trp by madhadron on 2006-11-01 13:55:35 as read
  • Global phylogeny of Mycobacterium tuberculosis based on single nucleotide polymorphism (SNP) analysis: insights into tuberculosis evolution, phylogenetic accuracy of other DNA fingerprinting systems, and recommendations for a minimal standard SNP set.
    J Bacteriol, Vol. 188, No. 2. (January 2006), pp. 759-772.
    posted to evolution mtuberculosis by madhadron on 2006-11-01 13:54:55 as ****
  • Thermal force approach to molecular evolution.
    Phys Biol, Vol. 1, No. 1-2. (June 2004)
    posted to evolution by madhadron on 2006-10-28 16:48:17 as **
  • notes Optimal gene partition into operons correlates with gene functional order
    Phys. Biol., Vol. 3, No. 3. (September 2006), 183.
    by Alon Zaslaver, Avi Mayo, Michal Ronen, Uri Alon
    posted to evolution genetics operons by madhadron on 2006-10-05 14:09:06 as **
  • Inductive Reasoning Games as Influenza Vaccination Models: Mean Field Analysis
    (8 Aug 2006)
    by Romulus Breban, Raffaele Vardavas, Sally Blower
    posted to evolution public_health vaccines by madhadron on 2006-08-11 22:38:46 as **
  • Parallel patterns of evolution in the genomes and transcriptomes of humans and chimpanzees.
    Science, Vol. 309, No. 5742. (16 September 2005), pp. 1850-1854.
  • The slow road to the eukaryotic genome.
    Bioessays, Vol. 28, No. 1. (January 2006), pp. 57-64.
    by L Lester, A Meade, M Pagel
    posted to eukaryotes evolution by madhadron on 2006-07-11 17:02:55 as ** along with 2 people dayjm balicea
  • The neomuran origin of archaebacteria, the negibacterial root of the universal tree and bacterial megaclassification.
    Int J Syst Evol Microbiol, Vol. 52, No. Pt 1. (January 2002), pp. 7-76.
    posted to bacteria evolution phylogeny by madhadron on 2006-07-11 17:02:12 as ** along with 1 person bnchakraborty
  • Streamlining and Simplification of Microbial Genome Architecture.
    Annu Rev Microbiol (23 August 2005)
    by Michael Lynch
    posted to bacteria evolution genetics by madhadron on 2006-07-11 17:01:35 as ** along with 1 person bnchakraborty
  • The evolution of transcription-initiation sites.
    Mol Biol Evol, Vol. 22, No. 4. (April 2005), pp. 1137-1146.
    by M Lynch, DG Scofield, X Hong
    posted to eukaryotes evolution transcription by madhadron on 2006-07-11 17:00:21 as ** along with 1 person emptyhb
  • Is Bacterial Persistence a Social Trait?
    PLoS ONE, Vol. 2, No. 8., 752.
    by Andy Gardner, Stuart A West, Ashleigh S Griffin
    posted to evolution persistence by madhadron on 2006-07-02 01:14:07 as read along with 685 people and 131 groups fernand0 dperkel egh jyuh samth sora florine ladygoat hopm hellige parmentierf ssn mortimer tinkha V plaugg ansobol mjaz berthelemy eldan pdlug zephoria carloscabanillas Janos bkliethermes nazareno elsantosneto januadiaboli yaroslavvb jurijmlotman geomblog srl bigga treycausey CSG mcphee chandrashekar denns matzke sherrivokey sona cassj lijil hlovise coolger incites bigmagpie alicetiara yorgos johannsen cavlec smbrower viller jenmy mlzafron tymmail sedging davidr macowell eimaj42jdp Flit BenWillems agallet hawesie sngourlay jolilius rmagf acer ville garyfeng danifazzio willwade gantlord melanieramage mgregg cwb neteler carneym crispinb rdlong lillekatt davemack agarza carsonr imcdnzl tjimenez Tolik lna dmikurube szityu michmill P2324548 jpbenda Vaccine tadm mkwalker anar grzegorz japple planetoid okarsligil stormybriggs UWerplab nbr inbetweener pafmon stina pgastrein 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  • The Origins of Euka