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de mcox library [191 articles]

Articles dernièrement stockés dans la bibliothèque de mcox .
  • A comparison of DNA- and RNA-based clone libraries from the same marine bacterioplankton community.
    FEMS microbiology ecology, Vol. 51, No. 3. (1 February 2005), pp. 341-352.
    by MM Moeseneder, JM Arrieta, GJ Herndl
    posted to rna library dna clone bacterioplankton by mcox on 2008-05-19 22:38:31 as **
  • Comparison of cellular and biomass specific activities of dominant bacterioplankton groups in stratified waters of the Celtic Sea.
    Applied and environmental microbiology, Vol. 67, No. 11. (November 2001), pp. 5210-5218.
    by MV Zubkov, BM Fuchs, PH Burkill, R Amann
    posted to biomass biogeochemistry bacterioplankton activity by mcox on 2008-05-19 22:36:36 as **
  • Navigating gene expression using microarrays--a technology review.
    Nat Cell Biol, Vol. 3, No. 8. (August 2001)
    by A Schulze, J Downward
    posted to review microarray bioinformatics by mcox on 2008-05-19 22:34:31 as ** along with 7 people and 2 groups ziquje numata alokm balicea dchughes jo_davies ale G4ID Genetics-of-Gambling
  • Simultaneous recovery of extracellular and intracellular DNA suitable for molecular studies from marine sediments.
    Applied and environmental microbiology, Vol. 71, No. 1. (January 2005), pp. 46-50.
    by C Corinaldesi, R Danovaro, A Dell'Anno
    posted to sediments methods extraction dna by mcox on 2008-05-19 22:33:17 as **
  • Detection of genes involved in biodegradation and biotransformation in microbial communities by using 50-mer oligonucleotide microarrays.
    Appl Environ Microbiol, Vol. 70, No. 7. (July 2004), pp. 4303-4317.
    by SK Rhee, X Liu, L Wu, SC Chong, X Wan, J Zhou
    posted to microarray functional by mcox on 2008-05-19 22:30:47 as ** along with 1 person icases
  • GenomicsMassively parallel sequencing
    Nature, Vol. 437, No. 7057. (14 September 2005), pp. 326-327.
    by Yu-Hui Rogers, Craig J Venter
    posted to sequencing review genomics by mcox on 2008-05-19 22:28:17 as ** along with 3 people and 1 group dayjm arve cdawson GIG
  • Metagenomics: genomic analysis of microbial communities.
    Annu Rev Genet, Vol. 38 (2004), pp. 525-552.
    by CS Riesenfeld, PD Schloss, J Handelsman
    posted to review metagenomics genomics by mcox on 2008-05-19 22:25:59 as ** along with 3 people knaseanka jmeppley wenhan
  • Suppressive subtractive hybridization as a tool for identifying genetic diversity in an environmental metagenome: the rumen as a model.
    Environ Microbiol, Vol. 6, No. 9. (September 2004), pp. 928-937.
    by EA Galbraith, DA Antonopoulos, BA White
    posted to subtractive screening metagenomics hybridization diversity by mcox on 2008-05-19 22:24:43 as ** along with 1 person rabu
  • Phylogeny-function analysis of (meta)genomic libraries: screening for expression of ribosomal RNA genes by large-insert library fluorescent in situ hybridization (LIL-FISH).
    Environmental microbiology, Vol. 6, No. 9. (September 2004), pp. 990-998.
    by JH Leveau, S Gerards, W de Boer, JA van Veen
    posted to screening rna metagenomics lilfish fish by mcox on 2008-05-19 22:23:51 as **
  • Conditionally amplifiable BACs: switching from single-copy to high-copy vectors and genomic clones.
    Genome research, Vol. 12, No. 9. (September 2002), pp. 1434-1444.
    by J Wild, Z Hradecna, W Szybalski
    posted to methods library fosmid bac by mcox on 2008-05-19 22:19:26 as **
  • Community genomics in microbial ecology and evolution
    Nature Reviews Microbiology, Vol. 3, No. 6. (01 June 2005), pp. 489-498.
    by Eric E Allen, Jillian F Banfield
    posted to review genomics ecology diversity by mcox on 2008-05-19 22:18:18 as ** along with 2 people knaseanka jmeppley
  • The metagenomics of soil
    Nature Reviews Microbiology, Vol. 3, No. 6. (01 June 2005), pp. 470-478.
    by Rolf Daniel
    posted to soil review metagenomics by mcox on 2008-05-19 22:16:45 as ** along with 3 people vrich johanviklund calamar
  • Opinion: Viral metagenomics
    Nature Reviews Microbiology, Vol. 3, No. 6. (01 June 2005), pp. 504-510.
    by Robert A Edwards, Forest Rohwer
    posted to viruses phage metagenomics marine by mcox on 2008-05-19 22:16:02 as ** along with 4 people and 1 group dayjm AaronDarling vwchan bluto beta
  • Application of tetranucleotide frequencies for the assignment of genomic fragments.
    Environ Microbiol, Vol. 6, No. 9. (September 2004), pp. 938-947.
    by H Teeling, A Meyerdierks, M Bauer, R Amann, FO Glöckner
    posted to tetranucleotide methods metagenomics genomics bioinformatics by mcox on 2008-05-19 22:15:07 as ** along with 3 people michC bluto george_g
  • Novel division level bacterial diversity in a Yellowstone hot spring.
    Journal of bacteriology, Vol. 180, No. 2. (January 1998), pp. 366-376.
    by P Hugenholtz, C Pitulle, KL Hershberger, NR Pace
    posted to pcr library diversity clone 16s by mcox on 2008-05-19 22:13:25 as **
  • Conservation of Y-linked genes during human evolution revealed by comparative sequencing in chimpanzee
    Nature, Vol. 437, No. 7055., pp. 100-103.
    by Jennifer F Hughes, Helen Skaletsky, Tatyana Pyntikova, Patrick J Minx, Tina Graves, Steve Rozen, Richard K Wilson, David C Page
    posted to human genomics comparative chimpanzee by mcox on 2008-05-19 22:12:25 as ** along with 2 people usagi-kirin cerami
  • A genome-wide comparison of recent chimpanzee and human segmental duplications
    Nature, Vol. 437, No. 7055., pp. 88-93.
    by Ze Cheng, Mario Ventura, Xinwei She, Philipp Khaitovich, Tina Graves, Kazutoyo Osoegawa, Deanna Church, Pieter Dejong, Richard K Wilson, Svante Pääbo, Mariano Rocchi, Evan E Eichler
    posted to human genomics comparative chimpanzee by mcox on 2008-05-19 22:10:30 as ** along with 3 people and 1 group great_apes treangen JeffR100 biodiversity_conservation
  • Historical review: Peptidyl transfer, the Monro era.
    Trends in biochemical sciences, Vol. 28, No. 11. (November 2003), pp. 619-624.
    by BE Maden
    posted to transfer ribosome review peptidyl by mcox on 2008-05-19 22:09:27 as **
  • Clones of human ribosomal DNA containing the complete 18 S-rRNA and 28 S-rRNA genes. Characterization, a detailed map of the human ribosomal transcription unit and diversity among clones.
    Biochem J, Vol. 246, No. 2. (1 September 1987), pp. 519-527.
    by BE Maden, CL Dent, TE Farrell, J Garde, FS McCallum, JA Wakeman
    posted to sequence human 18s by mcox on 2008-05-19 22:04:26 as ** along with 1 person and 1 group macowell BUiGEM
  • The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes.
    Nature, Vol. 423, No. 6942. (19 June 2003), pp. 825-837.
    by H Skaletsky, T Kuroda-Kawaguchi, PJ Minx, HS Cordum, L Hillier, LG Brown, S Repping, T Pyntikova, J Ali, T Bieri, A Chinwalla, A Delehaunty, K Delehaunty, H Du, G Fewell, L Fulton, R Fulton, T Graves, SF Hou, P Latrielle, S Leonard, E Mardis, R Maupin, J McPherson, T Miner, W Nash, C Nguyen, P Ozersky, K Pepin, S Rock, T Rohlfing, K Scott, B Schultz, C Strong, A Tin-Wollam, SP Yang, RH Waterston, RK Wilson, S Rozen, DC Page
    posted to y sequence human genomics chromosome by mcox on 2008-05-19 22:01:15 as ** along with 3 people tkandell Archaeogenetics usagi-kirin
  • Eukaryotic ribosomal RNA: the recent excitement in the nucleotide modification problem.
    Chromosoma, Vol. 105, No. 7-8. (June 1997), pp. 391-400.
    by BE Maden, JM Hughes
    posted to sequence ribosome human 18s by mcox on 2008-05-19 21:59:59 as **
  • Quantitative comparisons of 16S rRNA gene sequence libraries from environmental samples.
    Applied and environmental microbiology, Vol. 67, No. 9. (September 2001), pp. 4374-4376.
    by DR Singleton, MA Furlong, SL Rathbun, WB Whitman
    posted to statistics library diversity comparative clone 16s by mcox on 2008-05-19 21:54:18 as **
  • Integration of Microbial Ecology and Statistics: a Test To Compare Gene Libraries
    Appl. Environ. Microbiol., Vol. 70, No. 9. (1 September 2004), pp. 5485-5492.
    by Patrick D Schloss, Bret R Larget, Jo Handelsman
    posted to statistics library clone bioinformatics by mcox on 2008-05-19 21:52:20 as ** along with 1 person jmeppley
  • Pandit: a database of protein and associated nucleotide domains with inferred trees.
    Bioinformatics (Oxford, England), Vol. 19, No. 12. (12 August 2003), pp. 1556-1563.
    by S Whelan, PI de Bakker, N Goldman
    posted to phylogeny pandit functional database bioinformatics by mcox on 2008-05-19 21:49:21 as **
  • Analysis of bacterial community composition by oligonucleotide fingerprinting of rRNA genes.
    Applied and environmental microbiology, Vol. 68, No. 7. (July 2002), pp. 3243-3250.
    by L Valinsky, G Della Vedova, AJ Scupham, S Alvey, A Figueroa, B Yin, RJ Hartin, M Chrobak, DE Crowley, T Jiang, J Borneman
    posted to rna methods fingerprinting 16s by mcox on 2008-05-19 21:46:06 as **
  • Improved method for polynucleotide probe-based cell sorting, using DNA-coated microplates.
    Applied and environmental microbiology, Vol. 70, No. 1. (January 2004), pp. 494-497.
    by K Zwirglmaier, W Ludwig, KH Schleifer
    posted to probing functional cell-sorting by mcox on 2008-05-19 21:43:57 as **
  • Analysis of microbial gene transcripts in environmental samples.
    Applied and environmental microbiology, Vol. 71, No. 7. (July 2005), pp. 4121-4126.
    by RS Poretsky, N Bano, A Buchan, G LeCleir, J Kleikemper, M Pickering, WM Pate, MA Moran, JT Hollibaugh
    posted to subtractive library hybridisation expression diversity clone 16s by mcox on 2008-05-19 21:33:41 as ** along with 1 person and 1 group mjetten microbiology_nijmegen
  • Unexpectedly High Bacterial Diversity in Arctic Tundra Relative to Boreal Forest Soils, Revealed by Serial Analysis of Ribosomal Sequence Tags
    Appl. Environ. Microbiol., Vol. 71, No. 10. (1 October 2005), pp. 5710-5718.
    by Josh D Neufeld, William W Mohn
    posted to soil sarst diversity dgge 16s by mcox on 2008-05-19 21:31:04 as ** along with 1 person Olaf_Ilzins
  • Levels of Bacterial Community Diversity in Four Arid Soils Compared by Cultivation and 16S rRNA Gene Cloning
    Appl. Environ. Microbiol., Vol. 65, No. 4. (1 April 1999), pp. 1662-1669.
    by John Dunbar, Shannon Takala, Susan M Barns, Jody A Davis, Cheryl R Kuske
    posted to statistics soil pcr methods library diversity clone 16s by mcox on 2008-05-19 21:29:49 as ** along with 1 person Olaf_Ilzins
  • Use of microautoradiography combined with fluorescence in situ hybridization to determine dimethylsulfoniopropionate incorporation by marine bacterioplankton taxa.
    Applied and environmental microbiology, Vol. 70, No. 8. (August 2004), pp. 4648-4657.
    by M Vila, R Simó, RP Kiene, J Pinhassi, JM González, MA Moran, C Pedrós-Alió
    posted to marine marfish fish dmsp diversity bacterioplankton by mcox on 2008-05-19 21:28:31 as **
  • Stable-isotope probing implicates Methylophaga spp and novel Gammaproteobacteria in marine methanol and methylamine metabolism.
    ISME J, Vol. 1, No. 6. (October 2007), pp. 480-491.
    by JD Neufeld, H Schäfer, MJ Cox, R Boden, IR McDonald, JC Murrell
    posted to probing stable mine methylotrophs marine isotope c1 by mcox on 2008-05-19 21:25:39 as ** along with 1 person and 1 group kinestetika microbiology_nijmegen
  • Innovation: Stable isotope probing [mdash] linking microbial identity to function
    Nature Reviews Microbiology, Vol. 3, No. 6. (01 June 2005), pp. 499-504.
    by Marc G Dumont, Colin C Murrell
    posted to stabel review probing isotope by mcox on 2008-05-19 21:24:29 as **
  • Design of long oligonucleotide probes for functional gene detection in a microbial community
    Bioinformatics, Vol. 21, No. 22. (15 November 2005), pp. 4092-4100.
    by Won-Hyong Chung, Sung-Keun Rhee, Jin-Woo Bae, Zhe-Xue Quan, Yong-Ha Park
    posted to probe phylogeny hpd functional design bioinformatics by mcox on 2008-05-19 21:23:23 as ** along with 3 people stsaft cthachuk GeeSharpMinor
  • Combination of Fluorescent In Situ Hybridization and Microautoradiography---a New Tool for Structure-Function Analyses in Microbial Ecology
    Appl. Environ. Microbiol., Vol. 65, No. 3. (1 March 1999), pp. 1289-1297.
    by Natuscka Lee, Per H Nielsen, Kjar H Andreasen, Stefan Juretschko, Jeppe L Nielsen, Karl-Heinz Schleifer, Michael Wagner
    posted to situ marfish in fish diversity 16s by mcox on 2008-05-19 21:21:29 as ** along with 1 person vrich
  • In situ methods for assessment of microorganisms and their activities.
    Current opinion in microbiology, Vol. 1, No. 3. (June 1998), pp. 352-358.
    by R Amann, M Kühl
    posted to rna fish diversity 16s by mcox on 2008-05-19 21:20:24 as **
  • Linking genetic identity and function in communities of uncultured bacteria.
    Environmental microbiology, Vol. 3, No. 8. (August 2001), pp. 481-492.
    by ND Gray, IM Head
    posted to uncultured review diversity community by mcox on 2008-05-19 21:19:14 as **
  • Fidelity of select restriction endonucleases in determining microbial diversity by terminal-restriction fragment length polymorphism.
    Applied and environmental microbiology, Vol. 69, No. 8. (August 2003), pp. 4823-4829.
    by JJ Engebretson, CL Moyer
    posted to trflp methods diversity by mcox on 2008-05-19 18:43:13 as **
  • Stable-isotope probing as a tool in microbial ecology.
    Nature, Vol. 403, No. 6770. (10 February 2000), pp. 646-649.
    by S Radajewski, P Ineson, NR Parekh, JC Murrell
    posted to stable probing phylogeny methods isotope dna diversity by mcox on 2008-05-19 18:42:14 as **
  • Rapid quantification and taxonomic classification of environmental DNA from both prokaryotic and eukaryotic origins using a microarray.
    FEMS microbiology letters, Vol. 245, No. 2. (15 April 2005), pp. 271-278.
    by TZ Desantis, CE Stone, SR Murray, JP Moberg, GL Andersen
    posted to phylogeny phylochip microarray by mcox on 2008-05-19 18:41:17 as **
  • Quantification of mRNA using real-time reverse transcription PCR (RT-PCR): trends and problems
    J Mol Endocrinol, Vol. 29, No. 1. (1 August 2002), pp. 23-39.
    by Sa Bustin
    posted to review qpcr by mcox on 2008-05-19 18:40:02 as ** along with 3 people and 1 group rwood01 Jporci aubinhon Integrative_biology_behavior
  • Stable isotope probing of rRNA and DNA reveals a dynamic methylotroph community and trophic interactions with fungi and protozoa in oxic rice field soil.
    Environmental microbiology, Vol. 6, No. 1. (January 2004), pp. 60-72.
    by T Lueders, B Wagner, P Claus, MW Friedrich
    posted to stable soil rna probing methylotrophs isotope dna diversity by mcox on 2008-05-19 18:37:48 as **
  • RNA stable isotope probing, a novel means of linking microbial community function to phylogeny.
    Appl Environ Microbiol, Vol. 68, No. 11. (November 2002), pp. 5367-5373.
    by M Manefield, AS Whiteley, RI Griffiths, MJ Bailey
    posted to stable rna probing phylogeny isotope functional diversity by mcox on 2008-05-19 18:36:26 as **
  • rRNA sequence-based scanning electron microscopic detection of bacteria.
    Applied and environmental microbiology, Vol. 71, No. 9. (September 2005), pp. 5523-5531.
    by T Kenzaka, A Ishidoshiro, N Yamaguchi, K Tani, M Nasu
    posted to semish fish diversity 16s by mcox on 2008-05-19 18:33:35 as **
  • Extensive profiling of a complex microbial community by high-throughput sequencing.
    Applied and environmental microbiology, Vol. 68, No. 6. (June 2002), pp. 3055-3066.
    by JE Hill, RP Seipp, M Betts, L Hawkins, AG Van Kessel, WL Crosby, SM Hemmingsen
    posted to sequencing methods metagenomics functional by mcox on 2008-05-19 18:27:42 as **
  • Aminobacter ciceronei sp. nov. and Aminobacter lissarensis sp. nov., isolated from various terrestrial environments.
    International journal of systematic and evolutionary microbiology, Vol. 55, No. Pt 5. (September 2005), pp. 1827-1832.
    by IR McDonald, P Kämpfer, E Topp, KL Warner, MJ Cox, TL Hancock, LG Miller, MJ Larkin, V Ducrocq, C Coulter, DB Harper, JC Murrell, RS Oremland
    posted to soil mine methyl halide bromide aminobacter by mcox on 2008-05-19 18:17:26 as **
  • Detection and quantification of gene expression in environmental bacteriology.
    Applied and environmental microbiology, Vol. 70, No. 7. (July 2004), pp. 3795-3806.
    by FH Sharkey, IM Banat, R Marchant
    posted to qpcr methods by mcox on 2008-05-19 18:16:24 as **
  • Technical considerations for RNA-based stable isotope probing: an approach to associating microbial diversity with microbial community function.
    Rapid Commun Mass Spectrom, Vol. 16, No. 23. (2002), pp. 2179-2183.
    by M Manefield, AS Whiteley, N Ostle, P Ineson, MJ Bailey
    posted to stable rna probing methods isotope by mcox on 2008-05-19 18:14:02 as **
  • Validation of a more sensitive method for using spotted oligonucleotide DNA microarrays for functional genomics studies on bacterial communities.
    Environmental microbiology, Vol. 5, No. 10. (October 2003), pp. 933-943.
    by VJ Denef, J Park, JL Rodrigues, TV Tsoi, SA Hashsham, JM Tiedje
    posted to microarray methods genomics functional by mcox on 2008-05-19 18:12:51 as **
  • Dynamics of extracellular DNA in the marine environment.
    Applied and environmental microbiology, Vol. 53, No. 1. (January 1987), pp. 170-179.
    by JH Paul, WH Jeffrey, MF DeFlaun
    posted to marine dna biogeochemistry by mcox on 2008-05-19 18:10:44 as **
  • Genetic organization of the psbAD region in phages infecting marine Synechococcus strains.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 30. (27 July 2004), pp. 11007-11012.
    by A Millard, MR Clokie, DA Shub, NH Mann
    posted to phage marine by mcox on 2008-05-19 18:09:29 as **
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