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de renatomilani library [313 articles]

Articles dernièrement stockés dans la bibliothèque de renatomilani .
  • BMP-2/4 and BMP-6/7 Differentially Utilize Cell Surface Receptors to Induce Osteoblastic Differentiation of Human Bone Marrow-derived Mesenchymal Stem Cells
    J. Biol. Chem., Vol. 283, No. 30. (25 July 2008), pp. 20948-20958.
    by Karen Lavery, Pamela Swain, Dean Falb, Moulay H Alaoui-Ismaili
    posted to receptor osteogenesis cell bone bmp by renatomilani on 2008-07-19 16:02:23 as **
  • Parasites lead to evolution of robustness against gene loss in host signaling networks
    Mol Syst Biol, Vol. 4 (15 July 2008)
    by Marcel Salathe, Orkun S Soyer
    posted to signaling parasite network evolution by renatomilani on 2008-07-16 21:13:21 as ** along with 1 person jjray
  • Life Sciences and the web: a new era for collaboration
    Mol Syst Biol, Vol. 4 (1 July 2008)
    by Jonathan A Sagotsky, Le Zhang, Zhihui Wang, Sean Martin, Thomas S Deisboeck
    posted to web tool biology by renatomilani on 2008-07-16 21:11:43 as ** along with 5 people CameronNeylon tharris dullhunk neils reyez
  • The protist, Monosiga brevicollis, has a tyrosine kinase signaling network more elaborate and diverse than found in any known metazoan.
    Proceedings of the National Academy of Sciences of the United States of America (10 July 2008)
    by Gerard Manning, Susan L L Young, W Todd T Miller, Yufeng Zhai
    posted to kinase evolution by renatomilani on 2008-07-15 22:46:18 as ** along with 1 person manning
  • Unraveling Protein Networks with Power Graph Analysis
    PLoS Comput Biol, Vol. 4, No. 7. (11 July 2008), e1000108.
    by Loïc Royer, Matthias Reimann, Bill Andreopoulos, Michael Schroeder
    posted to tool protein network interaction graphs by renatomilani on 2008-07-15 21:16:44 as ** along with 12 people and 1 group jmuhlich AbnerCYH royerloic tmmurali stajich chad_davis askrajiv Borelli nuin reyez kengg Ema Berkeley Mycology
  • EVOLUTION: Modernizing the Modern Synthesis
    Science, Vol. 321, No. 5886. (11 July 2008), pp. 196-197.
    by Elizabeth Pennisi
    posted to evolution by renatomilani on 2008-07-15 19:23:22 as **
  • Computational modeling of the dynamics of the MAP kinase cascade activated by surface and internalized EGF receptors.
    Nat Biotechnol, Vol. 20, No. 4. (April 2002), pp. 370-375.
    by B Schoeberl, C Eichler-Jonsson, ED Gilles, G Müller
    posted to modelling map kinase bioinformatics by renatomilani on 2008-07-14 12:58:45 as ** along with 3 people lukaswindhager tuck sujaikumar
  • IBM RD 50-6 | Model-based design approaches in drug discovery: A parallel to traditional engineering approaches
    posted to network modelling drug by renatomilani on 2008-07-14 12:55:31 as **
  • ProteoWizard: Open Source Software for Rapid Proteomics Tools Development
    Bioinformatics (7 July 2008), btn323.
    by Darren Kessner, Matt Chambers, Robert Burke, David Agus, Parag Mallick
    posted to tool proteome by renatomilani on 2008-07-08 20:03:59 as ** along with 1 person groepl
  • InteroPorc: Automated Inference of Highly Conserved Protein Interaction Networks.
    Bioinformatics (Oxford, England) (28 May 2008)
    by Magali Michaut, Samuel Kerrien, Luisa Montecchi-Palazzi, Franck Chauvat, Corinne Cassier-Chauvat, Jean-Christophe C Aude, Pierre Legrain
    posted to tool protein interaction by renatomilani on 2008-07-07 16:14:08 as ** along with 2 people neils cabbagesofdoom
  • Seeded Bayesian Networks: constructing genetic networks from microarray data
    BMC Systems Biology, Vol. 2, No. 1. (2008)
    by Amira Djebbari, John Quackenbush
    posted to network microarray interaction data bayes by renatomilani on 2008-07-07 16:05:39 as ** along with 3 people jyuh phoenixzxl beete
  • Mapping the human protein interactome.
    Cell research (24 June 2008)
    by Daniel Figeys
    posted to protein interaction by renatomilani on 2008-07-07 03:38:15 as ** along with 1 person jyuh
  • Deducing topology of protein-protein interaction networks from experimentally measured sub-networks
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Ling Yang, Thomas Vondriska, Zhangang Han, Robb Maclellan, James Weiss, Zhilin Qu
    posted to protein network module interaction by renatomilani on 2008-07-04 18:49:31 as ** along with 2 people brianb neils
  • The Systems Biology Research Tool: evolvable open-source software
    BMC Systems Biology, Vol. 2, No. 1. (2008)
    by Jeremiah Wright, Andreas Wagner
    posted to tool systems network interaction bioinformatics by renatomilani on 2008-07-03 20:56:35 as ** along with 3 people jyuh reyez bootsy
  • Construction of a cancer-perturbed protein-protein interaction network for discovery of apoptosis drug targets
    BMC Systems Biology, Vol. 2, No. 1. (2008)
    by Liang H Chu, Bor S Chen
    posted to protein network interaction bioinformatics apoptosis by renatomilani on 2008-07-03 20:56:11 as ** along with 1 person reyez
  • Global investigation of protein-protein interactions in yeast Saccharomyces cerevisiae using re-occurring short polypeptide sequences
    Nucl. Acids Res. (27 June 2008), gkn390.
    by S Pitre, C North, M Alamgir, M Jessulat, A Chan, X Luo, JR Green, M Dumontier, F Dehne, A Golshani
    posted to protein interaction bioinformatics by renatomilani on 2008-07-03 20:55:51 as ** along with 3 people brianb pansapiens neils
  • Visualizing Global Properties of Large Complex Networks
    PLoS ONE, Vol. 3, No. 7. (2 July 2008), e2541.
    by Weijiang Li, Hiroyuki Kurata
    posted to tool network bioinformatics by renatomilani on 2008-07-03 19:29:45 as **
  • Why have serine/threonine/tyrosine kinases been evolutionarily selected in eukaryotic signaling cascades?
    Computational biology and chemistry (23 February 2008)
    by Hyung-Seok S Choi, Jeong-Rae R Kim, Sang-Woo W Lee, Kwang-Hyun H Cho
    posted to signaling kinase evolution bioinformatics by renatomilani on 2008-07-03 15:38:52 as *** along with 1 person carmenv
  • EVOLUTION: Building the Tree of Life, Genome by Genome
    Science, Vol. 320, No. 5884. (27 June 2008), pp. 1716-1717.
    by Elizabeth Pennisi
    posted to evolution by renatomilani on 2008-06-27 20:26:06 as ** along with 2 people gulsacan aprasad
  • DAnTE: a statistical tool for quantitative analysis of -omics data
    Bioinformatics (3 May 2008), btn217.
    by Ashoka D Polpitiya, Wei-Jun Qian, Navdeep Jaitly, Vladislav A Petyuk, Joshua N Adkins, David G Camp, Gordon A Anderson, Richard D Smith
    posted to tool methods data bioinformatics by renatomilani on 2008-06-27 16:20:58 as ** along with 2 people jyuh brianb
  • A Bayesian Estimator of Protein-Protein Association Probabilities
    Bioinformatics (22 May 2008), btn238.
    by JM Gilmore, DL Auberry, JL Sharp, AM White, KK Anderson, DS Daly
    posted to protein interaction bioinformatics bayes by renatomilani on 2008-06-27 16:19:39 as ** along with 2 people jyuh zwang
  • Characterization and prediction of residues determining protein functional specificity
    Bioinformatics, Vol. 24, No. 13. (1 July 2008), pp. 1473-1480.
    by John A Capra, Mona Singh
    posted to structure specificity protein function bioinformatics by renatomilani on 2008-06-27 16:18:12 as ** along with 1 person marck
  • Towards the use of argumentation in bioinformatics: a gene expression case study
    Bioinformatics, Vol. 24, No. 13. (1 July 2008), pp. i304-312.
    by Kenneth Mcleod, Albert Burger
    posted to methods data bioinformatics argumentation by renatomilani on 2008-06-27 16:17:32 as ** along with 1 person dullhunk
  • Biomolecular network motif counting and discovery by color coding
    Bioinformatics, Vol. 24, No. 13. (1 July 2008), pp. i241-249.
    by Noga Alon, Phuong Dao, Iman Hajirasouliha, Fereydoun Hormozdiari, Cenk S Sahinalp
    posted to network module bioinformatics by renatomilani on 2008-06-27 16:16:16 as **
  • Prediction of drug-target interaction networks from the integration of chemical and genomic spaces
    Bioinformatics, Vol. 24, No. 13. (1 July 2008), pp. i232-240.
    by Yoshihiro Yamanishi, Michihiro Araki, Alex Gutteridge, Wataru Honda, Minoru Kanehisa
    posted to protein network interaction drug bioinformatics by renatomilani on 2008-06-27 16:15:31 as ** along with 1 person girschick
  • Identifying functional modules in protein-protein interaction networks: an integrated exact approach
    Bioinformatics, Vol. 24, No. 13. (1 July 2008), pp. i223-231.
    by Marcus T Dittrich, Gunnar W Klau, Andreas Rosenwald, Thomas Dandekar, Tobias Muller
    posted to protein network module interaction bioinformatics by renatomilani on 2008-06-27 16:14:43 as ** along with 2 people chad_davis marck
  • Inferring differentiation pathways from gene expression
    Bioinformatics, Vol. 24, No. 13. (1 July 2008), pp. i156-164.
    by Ivan G Costa, Stefan Roepcke, Christoph Hafemeister, Alexander Schliep
    posted to pathway gene expression bioinformatics by renatomilani on 2008-06-27 16:14:13 as ** along with 2 people balicea roys
  • Systems biology: Merging data means more powerful networks
    Nat Rev Genet, Vol. 9, No. 7. (July 2008), pp. 501-501.
    by Patrick Goymer
    posted to systems network data by renatomilani on 2008-06-27 16:13:41 as ** along with 3 people marck reyez kengg
  • Preparing for (and avoiding) the courtroom : Article : Bioentrepreneur
    posted to intellectual-property by renatomilani on 2008-06-27 02:35:23 as **
  • In silico activity profiling reveals the mechanism of action of antimalarials discovered in a high-throughput screen
    Proceedings of the National Academy of Sciences (25 June 2008), 0802982105.
    by David Plouffe, Achim Brinker, Case Mcnamara, Kerstin Henson, Nobutaka Kato, Kelli Kuhen, Advait Nagle, Francisco Adrian, Jason T Matzen, Paul Anderson, Tae-Gyu Nam, Nathanael S Gray, Arnab Chatterjee, Jeff Janes, Frank S Yan, Richard Trager, Jeremy S Caldwell, Peter G Schultz, Yingyao Zhou, Elizabeth A Winzeler
    posted to pathway network malaria bioinformatics by renatomilani on 2008-06-26 15:47:13 as **
  • Osprey: a network visualization system.
    Genome Biol, Vol. 4, No. 3. (2003)
    by BJ Breitkreutz, C Stark, M Tyers
    posted to tool pathway interaction bioinformatics by renatomilani on 2008-06-24 15:03:02 as ** along with 7 people and 1 group hryk djsaab tdent ianturton ganden Evangelia maralena CHISEL
  • The universal protein resource (UniProt).
    Nucleic Acids Res, Vol. 36, No. Database issue. (January 2008)
    by
    posted to protein database bioinformatics by renatomilani on 2008-06-24 14:32:24 as ** along with 1 person jyuh
  • Comparative genomics of the eukaryotes.
    Science, Vol. 287, No. 5461. (24 March 2000), pp. 2204-2215.
    by GM Rubin, MD Yandell, JR Wortman, GL Gabor Miklos, CR Nelson, IK Hariharan, ME Fortini, PW Li, R Apweiler, W Fleischmann, JM Cherry, S Henikoff, MP Skupski, S Misra, M Ashburner, E Birney, MS Boguski, T Brody, P Brokstein, SE Celniker, SA Chervitz, D Coates, A Cravchik, A Gabrielian, RF Galle, WM Gelbart, RA George, LS Goldstein, F Gong, P Guan, NL Harris, BA Hay, RA Hoskins, J Li, Z Li, RO Hynes, SJ Jones, PM Kuehl, B Lemaitre, JT Littleton, DK Morrison, C Mungall, PH O'Farrell, OK Pickeral, C Shue, LB Vosshall, J Zhang, Q Zhao, XH Zheng, S Lewis
    posted to genome evolution by renatomilani on 2008-06-24 14:25:51 as ** along with 6 people CitoJam ujh jwortman rebeccahainess gurkanbebek cmor
  • Evolution of protein kinase signaling from yeast to man
    Trends in Biochemical Sciences, Vol. 27, No. 10. (1 October 2002), pp. 514-520.
    by Gerard Manning, Gregory D Plowman, Tony Hunter, Sucha Sudarsanam
    posted to kinome kinase evolution by renatomilani on 2008-06-24 14:22:46 as **
  • The sequence of the human genome.
    Science, Vol. 291, No. 5507. (16 February 2001), pp. 1304-1351.
    by JC Venter, MD Adams, EW Myers, PW Li, RJ Mural, GG Sutton, HO Smith, M Yandell, CA Evans, RA Holt, JD Gocayne, P Amanatides, RM Ballew, DH Huson, JR Wortman, Q Zhang, CD Kodira, XH Zheng, L Chen, M Skupski, G Subramanian, PD Thomas, J Zhang, GL Gabor Miklos, C Nelson, S Broder, AG Clark, J Nadeau, VA McKusick, N Zinder, AJ Levine, RJ Roberts, M Simon, C Slayman, M Hunkapiller, R Bolanos, A Delcher, I Dew, D Fasulo, M Flanigan, L Florea, A Halpern, S Hannenhalli, S Kravitz, S Levy, C Mobarry, K Reinert, K Remington, J Abu-Threideh, E Beasley, K Biddick, V Bonazzi, R Brandon, M Cargill, I Chandramouliswaran, R Charlab, K Chaturvedi, Z Deng, V Di Francesco, P Dunn, K Eilbeck, C Evangelista, AE Gabrielian, W Gan, W Ge, F Gong, Z Gu, P Guan, TJ Heiman, ME Higgins, RR Ji, Z Ke, KA Ketchum, Z Lai, Y Lei, Z Li, J Li, Y Liang, X Lin, F Lu, GV Merkulov, N Milshina, HM Moore, AK Naik, VA Narayan, B Neelam, D Nusskern, DB Rusch, S Salzberg, W Shao, B Shue, J Sun, Z Wang, A Wang, X Wang, J Wang, M Wei, R Wides, C Xiao, C Yan, A Yao, J Ye, M Zhan, W Zhang, H Zhang, Q Zhao, L Zheng, F Zhong, W Zhong, S Zhu, S Zhao, D Gilbert, S Baumhueter, G Spier, C Carter, A Cravchik, T Woodage, F Ali, H An, A Awe, D Baldwin, H Baden, M Barnstead, I Barrow, K Beeson, D Busam, A Carver, A Center, ML Cheng, L Curry, S Danaher, L Davenport, R Desilets, S Dietz, K Dodson, L Doup, S Ferriera, N Garg, A Gluecksmann, B Hart, J Haynes, C Haynes, C Heiner, S Hladun, D Hostin, J Houck, T Howland, C Ibegwam, J Johnson, F Kalush, L Kline, S Koduru, A Love, F Mann, D May, S McCawley, T McIntosh, I McMullen, M Moy, L Moy, B Murphy, K Nelson, C Pfannkoch, E Pratts, V Puri, H Qureshi, M Reardon, R Rodriguez, YH Rogers, D Romblad, B Ruhfel, R Scott, C Sitter, M Smallwood, E Stewart, R Strong, E Suh, R Thomas, NN Tint, S Tse, C Vech, G Wang, J Wetter, S Williams, M Williams, S Windsor, E Winn-Deen, K Wolfe, J Zaveri, K Zaveri, JF Abril, R Guigó, MJ Campbell, KV Sjolander, B Karlak, A Kejariwal, H Mi, B Lazareva, T Hatton, A Narechania, K Diemer, A Muruganujan, N Guo, S Sato, V Bafna, S Istrail, R Lippert, R Schwartz, B Walenz, S Yooseph, D Allen, A Basu, J Baxendale, L Blick, M Caminha, J Carnes-Stine, P Caulk, YH Chiang, M Coyne, C Dahlke, A Mays, M Dombroski, M Donnelly, D Ely, S Esparham, C Fosler, H Gire, S Glanowski, K Glasser, A Glodek, M Gorokhov, K Graham, B Gropman, M Harris, J Heil, S Henderson, J Hoover, D Jennings, C Jordan, J Jordan, J Kasha, L Kagan, C Kraft, A Levitsky, M Lewis, X Liu, J Lopez, D Ma, W Majoros, J McDaniel, S Murphy, M Newman, T Nguyen, N Nguyen, M Nodell, S Pan, J Peck, M Peterson, W Rowe, R Sanders, J Scott, M Simpson, T Smith, A Sprague, T Stockwell, R Turner, E Venter, M Wang, M Wen, D Wu, M Wu, A Xia, A Zandieh, X Zhu
    posted to genome by renatomilani on 2008-06-24 14:18:17 as ** along with 18 people and 3 groups Neeperando CitoJam frohike brant Cortel jwortman jnemecek bicko Dax42 yas balajis xdeupi arcticrasta dgront olympos incovoma naegele mimulus_99 Proteinkinases T_lab LabCompMed
  • A computational analysis of the protein-protein interaction networks in neurodegenerative diseases
    BMC Systems Biology, Vol. 2, No. 1. (2008)
    by Joaquin Goni, Francisco Esteban, Nieves V de Mendizabal, Jorge Sepulcre, Sergio A Treijano, Ion Agirrezabal, Pablo Villoslada
    posted to protein network methods interaction bioinformatics by renatomilani on 2008-06-21 03:50:49 as ** along with 3 people AbnerCYH reyez bootsy
  • Ontological visualization of protein-protein interactions.
    BMC Bioinformatics, Vol. 6 (2005)
    by HJ Drabkin, C Hollenbeck, DP Hill, JA Blake
    posted to tool protein interaction go bioinformatics by renatomilani on 2008-06-20 19:42:20 as ** along with 1 person and 1 group irenas dbk-lab
  • Computational approaches to protein-protein interaction.
    J Struct Funct Genomics, Vol. 4, No. 4. (2003), pp. 245-255.
    by G Franzot, O Carugo
    posted to tool protein interaction bioinformatics by renatomilani on 2008-06-20 19:41:41 as ** along with 2 people bicko chad_davis
  • Computational analyses of high-throughput protein-protein interaction data.
    Curr Protein Pept Sci, Vol. 4, No. 3. (June 2003), pp. 159-181.
    by Y Chen, D Xu
    posted to network interaction bioinformatics by renatomilani on 2008-06-20 19:41:05 as ** along with 1 person iris_2001
  • Bioinformatics analysis for interactive proteomics.
    Current protocols in protein science / editorial board, John E. Coligan ... [et al.], Vol. Chapter 25 (December 2005)
    by Y Chen, D Xu
    posted to proteome network interaction bioinformatics by renatomilani on 2008-06-20 19:40:30 as **
  • Network motifs: simple building blocks of complex networks.
    Science, Vol. 298, No. 5594. (25 October 2002), pp. 824-827.
    by R Milo, S Shen-Orr, S Itzkovitz, N Kashtan, D Chklovskii, U Alon
    posted to network module by renatomilani on 2008-06-20 19:39:16 as ** along with 38 people and 8 groups subhacom cmor carlk pbull i-stevenson applesnow shikin camster korakot aalibes ChaTo imouthesmp Borelli lfriedl alexg balicea tny ssb wnpx ddahlem cmm donade neveaire griota gurkanbebek jtaylor josepe iris_2001 michaelmampaey rebeccamancy karfunkel lenov Evangelia roys tfogal zibuyu maralena stefanoallesina GeneGo Philosophy_of_Information dbk-lab Blog_and_Wiki_Research kdl FAB-lab ColDyn ADMiRes
  • The identification of functional modules from the genomic association of genes.
    Proc Natl Acad Sci U S A, Vol. 99, No. 9. (30 April 2002), pp. 5890-5895.
    by B Snel, P Bork, MA Huynen
    posted to protein network module function by renatomilani on 2008-06-20 19:31:56 as ** along with 3 people ujh ichbins81 karfunkel
  • Function prediction and protein networks
    Current Opinion in Cell Biology, Vol. 15, No. 2. (April 2003), pp. 191-198.
    by Martijn A Huynen, Berend Snel, Christian Mering, Peer Bork
    posted to protein network module function by renatomilani on 2008-06-20 19:27:50 as **
  • Phosphoproteomics toolbox: Computational biology, protein chemistry and mass spectrometry
    FEBS Letters, Vol. 580, No. 20. (4 September 2006), pp. 4764-4770.
    by Majbrit Hjerrild, Steen Gammeltoft
    posted to tool kinase bioinformatics by renatomilani on 2008-06-20 19:18:12 as **
  • Experimental and bioinformatic approaches for interrogating protein-protein interactions to determine protein function
    J Mol Endocrinol, Vol. 34, No. 2. (1 April 2005), pp. 263-280.
    by Arnaud Droit, Guy G Poirier, Joanna M Hunter
    posted to protein network bioinformatics by renatomilani on 2008-06-20 19:15:53 as *****
  • Tony Hunter: Kinase king
    J. Cell Biol., Vol. 181, No. 4. (19 May 2008), pp. 572-573.
    by Ruth Williams
    posted to kinase by renatomilani on 2008-06-19 20:36:41 as **
  • PhosphoBlast, a Computational Tool for Comparing Phosphoprotein Signatures among Large Datasets.
    Mol Cell Proteomics, Vol. 7, No. 1. (January 2008), pp. 145-162.
    by Y Wang, RL Klemke
    posted to tool kinase bioinformatics by renatomilani on 2008-06-19 20:36:00 as ** along with 1 person jyuh
  • PepCyber:P~PEP: a database of human protein protein interactions mediated by phosphoprotein-binding domains.
    Nucleic acids research, Vol. 36, No. Database issue. (January 2008)
    by W Gong, D Zhou, Y Ren, Y Wang, Z Zuo, Y Shen, F Xiao, Q Zhu, A Hong, X Zhou, X Gao, T Li
    posted to tool protein interaction database by renatomilani on 2008-06-19 20:32:36 as **
  • Getting connected: analysis and principles of biological networks.
    Genes Dev, Vol. 21, No. 9. (1 May 2007), pp. 1010-1024.
    by X Zhu, M Gerstein, M Snyder
    posted to systems network bioinformatics by renatomilani on 2008-06-19 20:11:13 as ***** along with 9 people carlk jfr balajis grahamc fishtank nedwards naegele Evangelia kristen
  • Uses for JNK: the Many and Varied Substrates of the c-Jun N-Terminal Kinases
    Microbiol. Mol. Biol. Rev., Vol. 70, No. 4. (1 December 2006), pp. 1061-1095.
    by Marie A Bogoyevitch, Bostjan Kobe
    posted to jnk by renatomilani on 2008-06-19 20:04:49 as **
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