de stajich library [583 articles]

Science, Vol. 321, No. 5885. (4 July 2008), pp. 26a-27.

by Jocelyn Kaiser

posted to news genomics funding cancer by stajich on 2008-07-16 17:55:26 as along with 1 person and 1 group reyez Berkeley Mycology

PLoS Comput Biol, Vol. 4, No. 7. (11 July 2008), e1000108.

by Loïc Royer, Matthias Reimann, Bill Andreopoulos, Michael Schroeder

posted to visualization protein_interactions protein methods graphics bioinformatics by stajich on 2008-07-16 17:12:31 as along with 13 people and 1 group MatthiasReimann jmuhlich AbnerCYH royerloic tmmurali chad_davis renatomilani askrajiv Borelli nuin reyez kengg Ema Berkeley Mycology

BMC Bioinformatics, Vol. 9 (11 July 2008), 307.

by Carolin Strobl, Anne-Laure Boulesteix, Thomas Kneib, Thomas Augustin, Achim Zeileis

posted to randomforest methods bioinformatics by stajich on 2008-07-16 12:29:30 as along with 1 group Berkeley Mycology

Mol Biol Evol, Vol. 25, No. 8. (1 August 2008), pp. 1576-1580.

by Barry G Hall

posted to statistics molecular_evolution methods bioinformatics alignment by stajich on 2008-07-15 16:36:43 as along with 1 group Berkeley Mycology

BMC Genomics, Vol. 9 (03 July 2008), 318.

by Angeles M Martinez-Godoy, Nuria Mauri, Jose Juarez, Carmen M Marques, Julia Santiago, Javier Forment, Jose Gadea

posted to plant microarray citrus by stajich on 2008-07-09 05:44:15 as along with 1 person and 1 group JavierTerol Berkeley Mycology

BMC Evolutionary Biology, Vol. 8 (01 July 2008), 190.

by Chendhore S Veerappan, Zoya Avramova, Etsuko N Moriyama

posted to yeast multicellular fungi filamentous by stajich on 2008-07-09 00:20:23 as along with 1 group Berkeley Mycology

Current opinion in plant biology, Vol. 9, No. 6. (December 2006), pp. 616-620.

by JN Johansen, S Vernhettes, H Höfte

posted to plant cell_wall cellulose_synthase by stajich on 2008-07-08 22:45:31 as along with 1 group Berkeley Mycology

Nature Reviews Molecular Cell Biology, Vol. 6, No. 11. (01 November 2005), pp. 850-861.

by Daniel J Cosgrove

posted to plant cellulose_synthase by stajich on 2008-07-08 22:08:52 as along with 1 group Berkeley Mycology

Genome Res., Vol. 18, No. 7. (1 July 2008), pp. 1133-1142.

by Nitin Gupta, Jamal Benhamida, Vipul Bhargava, Daniel Goodman, Elisabeth Kain, Ian Kerman, Ngan Nguyen, Noah Ollikainen, Jesse Rodriguez, Jian Wang, Mary S Lipton, Margaret Romine, Vineet Bafna, Richard D Smith, Pavel A Pevzner

posted to undergraduate_research proteomics by stajich on 2008-07-08 18:20:05 as along with 1 person and 1 group biehl Berkeley Mycology

PLoS Biology, Vol. 6, No. 7. (1 July 2008), e175.

by Jon W Huss, Camilo Orozco, James Goodale, Chunlei Wu, Serge Batalov, Tim J Vickers, Faramarz Valafar, Andrew I Su

posted to wiki gene annotation by stajich on 2008-07-08 16:23:49 as along with 10 people and 2 groups GMTurner ChrisEvelo barriot kristina reyez zwang kintoki sjc tharris dullhunk VisionLab Berkeley Mycology

DNA Res, Vol. 9, No. 5. (31 October 2002), pp. 149-156.

by S Kawano, K Tajima, Y Uemori, H Yamashita, T Erata, M Munekata, M Takai

posted to cellulose_synthase bacteria by stajich on 2008-07-08 06:59:27 as along with 1 person and 1 group orenoCiteULike Berkeley Mycology

J. Bacteriol., Vol. 177, No. 4. (1 February 1995), pp. 1069-1075.

by AG Matthysse, S White, R Lightfoot

posted to cellulose_synthase bacteria by stajich on 2008-07-08 06:59:19 as along with 1 group Berkeley Mycology

Plant Cell, Vol. 20, No. 3. (1 March 2008), pp. 720-738.

by Laura J Grenville-Briggs, Victoria L Anderson, Johanna Fugelstad, Anna O Avrova, Jamel Bouzenzana, Alison Williams, Stephan Wawra, Stephen C Whisson, Paul R Birch, Vincent Bulone, Pieter van West

posted to phytophthora cell_wall cellulose_synthase by stajich on 2008-07-08 01:51:22 as along with 1 group Berkeley Mycology

Science, Vol. 321, No. 5885. (4 July 2008), pp. 121-123.

by Michael J Sanderson

posted to phylogenetics phylogenetic_marker_selection methods by stajich on 2008-07-07 04:58:37 as along with 6 people and 1 group aprasad djkt gulsacan dchughes marck caseybrown Berkeley Mycology

FEMS microbiology reviews, Vol. 32, No. 3. (May 2008), pp. 501-521.

by P Baldrian, V Valásková

posted to cellulose_degradation basidiomycota by stajich on 2008-07-07 03:50:20 as along with 1 group Berkeley Mycology

Microbiological research, Vol. 163, No. 3. (2008), pp. 267-276.

by A Keszthelyi, Z Hamari, I Pfeiffer, C Vágvölgyi, J Kucsera

posted to toxin cryptococcus antifungal by stajich on 2008-07-07 03:45:48 as along with 1 group Berkeley Mycology

Eukaryotic cell (27 June 2008)

by Seona Thompson, Nirvana J J Croft, Antonis Sotiriou, Hugh D D Piggins, Susan K K Crosthwaite

posted to neurospora heat_shock gene_expression asexual_development by stajich on 2008-07-07 03:42:48 as along with 1 group Berkeley Mycology

Science (New York, N.Y.), Vol. 320, No. 5882. (13 June 2008), pp. 1504-1506.

by O Bayram, S Krappmann, M Ni, JW Bok, K Helmstaedt, O Valerius, S Braus-Stromeyer, NJ Kwon, NP Keller, JH Yu, GH Braus

posted to secondary_metabolite light_response gene_expression development aspergillus by stajich on 2008-07-07 03:38:45 as along with 1 person and 1 group bcondon Berkeley Mycology

Bioinformatics (Oxford, England), Vol. 24, No. 13. (1 July 2008)

by MS Bansal, O Eulenstein

posted to methods genome gene_duplication bioinformatics by stajich on 2008-07-07 03:37:26 as along with 1 person and 1 group tharris Berkeley Mycology

BMC Genomics, Vol. 9 (29 April 2008), 200.

by Bryony AP Williams, Renny CH Lee, James J Becnel, Louis M Weiss, Naomi M Fast, Patrick J Keeling

posted to microsporidia genome comparative_genomics by stajich on 2008-07-07 03:36:49 as along with 1 group Berkeley Mycology

BMC Genomics, Vol. 9 (01 May 2008), 203.

by Yonghong Zhang, Zhipeng Qu, Wenming Zheng, Bo Liu, Xiaojie Wang, Xiaodan Xue, Liangsheng Xu, Lili Huang, Qingmei Han, Jie Zhao, Zhensheng Kang

posted to sexual_development rust puccinia gene_expression development by stajich on 2008-07-07 03:35:47 as along with 1 group Berkeley Mycology

Nature (25 June 2008)

by Des, Mark D Rausher

posted to plants gene duplication anthocyanin by stajich on 2008-07-07 03:32:20 as along with 1 person and 1 group bpcusack Berkeley Mycology

Bioinformatics (Oxford, England), Vol. 24, No. 13. (1 July 2008)

by CB Do, CS Foo, S Batzoglou

posted to rna methods folding bioinformatics alignment by stajich on 2008-07-07 03:32:02 as along with 1 person and 1 group bootsy Berkeley Mycology

Genetics, Vol. 161, No. 4. (August 2002), pp. 1483-1495.

by PK Shiu, RL Metzenberg

posted to neurospora msud meiotic_silencing meiosis by stajich on 2008-07-02 01:18:39 as along with 1 group Berkeley Mycology

Proceedings of the National Academy of Sciences of the United States of America, Vol. 103, No. 7. (14 February 2006), pp. 2243-2248.

by PK Shiu, D Zickler, NB Raju, G Ruprich-Robert, RL Metzenberg

posted to neurospora msud meiotic_silencing meiosis by stajich on 2008-07-02 01:18:23 as along with 1 group Berkeley Mycology

Cell, Vol. 107, No. 7. (28 December 2001), pp. 905-916.

by PK Shiu, NB Raju, D Zickler, RL Metzenberg

posted to neurospora msud meiotic_silencing meiosis by stajich on 2008-07-02 01:17:57 as along with 1 person and 1 group erbon Berkeley Mycology

Systematic Biology, Vol. 57, No. 3. (2008), pp. 507-514.

by Benoît Dayrat, Philip D Cantino, Julia A Clarke, Kevin de Queiroz

posted to phylocode by stajich on 2008-07-01 16:57:45 as along with 1 group Berkeley Mycology

PLoS ONE, Vol. 3, No. 6. (25 June 2008), e2502.

by Scott R Loarie, Benjamin E Carter, Katharine Hayhoe, Sean Mcmahon, Richard Moe, Charles A Knight, David D Ackerly

posted to plants diversity climate_change by stajich on 2008-07-01 15:10:45 as along with 1 group Berkeley Mycology

PLoS Genet, Vol. 4, No. 6. (27 June 2008), e1000106.

by Emily E Hare, Brant K Peterson, Venky N Iyer, Rudolf Meier, Michael B Eisen

posted to transcription_factor promotor evolution evodevo even-skipped drosophila binding_site by stajich on 2008-06-28 18:16:38 as along with 5 people and 2 groups emptyhb pradiptaray cisevol caseybrown djkt cis-regulatory-evolution Berkeley Mycology

Appl. Environ. Microbiol., Vol. 74, No. 13. (1 July 2008), pp. 4164-4174.

by Thomas Schoenfeld, Melodee Patterson, Paul M Richardson, Eric K Wommack, Mark Young, David Mead

posted to yellowstone virus thermophile metagenomics hot_spring extremophile by stajich on 2008-06-27 05:04:26 as along with 2 people and 1 group tharris skato_toyaku Berkeley Mycology

The Plant journal : for cell and molecular biology (18 June 2008)

by Gunther Doehlemann, Ramon Wahl, Robin J J Horst, Lars M M Voll, Björn Usadel, Fabien Poree, Mark Stitt, Jörn Pons-Kühnemann, Uwe Sonnewald, Regine Kahmann, Jörg Kämper

posted to ustilago transcriptional_regulation plantpathogen maize by stajich on 2008-06-26 08:04:59 as along with 1 person and 1 group bcondon Berkeley Mycology

PLoS Biology, Vol. 6, No. 6. (1 June 2008), e135.

by Carol A Edwards, Andrew J Mungall, Lucy Matthews, Edward Ryder, Dionne J Gray, Andrew J Pask, Geoffrey Shaw, Jennifer A Graves, Jane Rogers, Ian Dunham, Marilyn B Renfree, Anne C Ferguson-Smith

posted to mirna mammal imprinting by stajich on 2008-06-26 07:08:15 as along with 1 person and 1 group djkt Berkeley Mycology

Trends in genetics : TIG (29 May 2008)

by Matthew V V Rockman, David L L Stern

posted to evolution evodevo drosophila cis-regulatory by stajich on 2008-06-22 20:12:47 as along with 1 person and 1 group Stew Berkeley Mycology

Trends in Genetics, Vol. 24, No. 7. (July 2008), pp. 336-343.

by Daven C Presgraves

posted to speciation sex_chromosome drosophila by stajich on 2008-06-22 20:12:28 as along with 1 person and 1 group pradiptaray Berkeley Mycology

Trends in Genetics, Vol. In Press, Corrected Proof

by Yi Zhao, Shunmin He, Changning Liu, Songwei Ru, Haitao Zhao, Zhen Yang, Pengcheng Yang, Xiongyin Yuan, Shiwei Sun, Dongbo Bu, Jiefu Huang, Geir Skogerbø, Runsheng Chen

posted to regulatory_evolution regulation noncoding_rna mirna metazoan gene_expression by stajich on 2008-06-22 20:12:10 as along with 4 people and 2 groups bertelsen biozy imtechnology maralena Berkeley Mycology microRNA

Nature Precedings (19 June 2008)

by David Carter, Gianni Liti, Alan Moses, Leopold Parts, Stephen James, Robert Davey, Ian Roberts, Anders Blomberg, Jonas Warringer, Austin Burt, Vassiliki Koufopanou, Isheng Tsai, Casey Bergman, Douda Bensasson, Michael O’kelly, Alexander van Oudenaarden, David Barton, Elizabeth Bailes, Matthew Jones, Michael Quail, Ian Goodhead, Sarah Sims, Frances Smith, Richard Durbin, Edward Louis

posted to yeast population_genomics population_genetics by stajich on 2008-06-21 17:21:29 as along with 1 person and 1 group michaelbarton Berkeley Mycology

Proceedings of the National Academy of Sciences of the United States of America (7 May 2008)

by Rosa Tarrío, Francisco J J Ayala, Francisco Rodríguez-Trelles

posted to intron_sliding intron_loss intron_gain intron_evolution evolution by stajich on 2008-06-20 18:00:41 as along with 3 people and 1 group clearbluespring bootsy imtechnology Berkeley Mycology

International journal of food microbiology (2 May 2008)

by M Sánchez-Hervás, J V V Gil, F Bisbal, D Ramón, P V V Martínez-Culebras

posted to plantpathogen mycotoxin fungi cocoa by stajich on 2008-06-16 04:07:43 as along with 1 group Berkeley Mycology

Molecular phylogenetics and evolution (29 April 2008)

by József Geml, Rodham E E Tulloss, Gary A A Laursen, Nina A A Sazanova, D L L Taylor

posted to population_genetics phylogeography mycorrhizal fungi dispersal amanita by stajich on 2008-06-15 23:42:10 as along with 1 person and 1 group pradiptaray Berkeley Mycology

Mol Biol Evol, Vol. 25, No. 7. (1 July 2008), pp. 1307-1320.

by Si Q Le, Olivier Gascuel

posted to protein_evolution phylogenetics molecular_evolution methods evolution bioinformatics by stajich on 2008-06-14 07:08:00 as along with 1 person and 1 group friendpine Berkeley Mycology

Organic & biomolecular chemistry, Vol. 6, No. 11. (7 June 2008), pp. 1895-1897.

by RB Williams, JC Henrikson, AR Hoover, AE Lee, RH Cichewicz

posted to secondary_metabolite fungi filamentous ascomycota by stajich on 2008-06-13 23:36:51 as along with 1 group Berkeley Mycology

Science, Vol. 320, No. 5882. (13 June 2008), 1464.

by Sarah Sallon, Elaine Solowey, Yuval Cohen, Raia Korchinsky, Markus Egli, Ivan Woodhatch, Orit Simchoni, Mordechai Kislev

posted to germination extinction by stajich on 2008-06-13 17:00:59 as

Current biology : CB, Vol. 18, No. 10. (20 May 2008), pp. 758-762.

by C Addo-Quaye, TW Eshoo, DP Bartel, MJ Axtell

posted to solexa smallrna sirna sequencing mirna methods illumina bioinformatics by stajich on 2008-06-13 01:19:25 as along with 1 group Berkeley Mycology

Nature biotechnology (9 June 2008)

by Marcelo A A German, Manoj Pillay, Dong-Hoon H Jeong, Amit Hetawal, Shujun Luo, Prakash Janardhanan, Vimal Kannan, Linda A A Rymarquis, Kan Nobuta, Rana German, Emanuele De Paoli, Cheng Lu, Gary Schroth, Blake C C Meyers, Pamela J J Green

posted to solexa smallrna sequencing mirna methods htg bioinformatics by stajich on 2008-06-13 01:11:30 as along with 1 group Berkeley Mycology

Genome Res. (11 June 2008), gr.079558.108.

by John Marioni, Cristopher Mason, Shrikant Mane, Matthew Stephens, Yoav Gilad

posted to solexa sequencing rnaseq methods gene_expression bioinformatics by stajich on 2008-06-11 21:57:14 as along with 11 people and 1 group Ema jyuh caseybrown vmarshal lusk fpattyn ela503 semrich balicea vega giovanni Berkeley Mycology

Nucl. Acids Res., Vol. 36, No. 10. (1 June 2008), e56.

by Michael Bekaert, Emma C Teeling

posted to primer_design bioinformatics by stajich on 2008-06-09 16:41:38 as along with 3 people and 1 group niallhaslam tharris jyuh Berkeley Mycology

BMC Genomics, Vol. 9, No. 1. (2008)

by Linda Hellborg, Megan Woolfit, Mattias A Hellborg, Jure Piskur

posted to yeast transporter saccharomyces gene_family gene_duplication fungi ascomycota by stajich on 2008-06-09 05:45:17 as along with 1 person and 1 group neils Berkeley Mycology

PLoS genetics, Vol. 3, No. 7. (20 July 2007)

by Fusheng Wei, Ed Coe, William Nelson, Arvind K K Bharti, Fred Engler, Ed Butler, Hyeran Kim, Jose Luis L Goicoechea, Mingsheng Chen, Seunghee Lee, Galina Fuks, Hector Sanchez-Villeda, Steven Schroeder, Zhiwei Fang, Michael McMullen, Georgia Davis, John E E Bowers, Andrew H H Paterson, Mary Schaeffer, Jack Gardiner, Karen Cone, Joachim Messing, Carol Soderlund, Rod A A Wing

posted to synteny maize genome_evolution genome by stajich on 2008-06-09 05:37:06 as along with 1 person and 1 group kengg Berkeley Mycology

Eukaryotic cell, Vol. 6, No. 8. (August 2007), pp. 1299-1309.

by T Krajaejun, GM Gauthier, CA Rappleye, TD Sullivan, BS Klein

posted to septin rnai fungi blastomyces by stajich on 2008-06-09 00:55:09 as along with 1 group Berkeley Mycology

Development genes and evolution, Vol. 218, No. 1. (January 2008), pp. 23-32.

by M Gauthier, BM Degnan

posted to multicellular metazoa evolution development by stajich on 2008-06-09 00:54:16 as along with 1 group Berkeley Mycology